Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00390 ATGGCAGTGCAACCTGAAGTTGAGCATCCAAGGAAGGCCTATGGATGGGCTGCTAGGGATACATCTGGTGTTCTCTCTCCATTTTTGTTCTCCAGAAGAAAAACAGGTGAGAAAGATGTGACATTCAAGGTGTTGTACTGTGGAATATGTCACTCGGACCTTCACAAATTGAAAAATGAATGGAGTGATTCCATTTATCCACTTGTTCCTGGGCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTTAAGGTTGGAGAGAAGGTGGCTGTGGGATGCTTGGTTGGGTCTTGTCACTCATGCCAGAACTGTGTCAACAATCTTGAGAATTACTGCCAAAAAGCGATTCCCACATATGGTGCCAAGTATGTGGATGGCAGCATCACATATGGGGGATTCTCTGACTTCATGGTTGCAGATGAGCACTTTGTTGTCAGCATTCCCAATGGCCTACCTCTTGATGCTGCTGCTCCTCTGCTTTGTGCAGGGATCACAGTGTATGGCCCTTTGAGATATTTTGGGCTTGATAAACCTGGTTTGCACCTGGGAGTGGTTGGCCTTGGAGGACTAGGCCATCTGGCTGTCAAGTTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATTAGTACCTCTCCTAATAAGAAAGAAGAAGCCATTCAACATCTTGGAGCAGATTCCTTTCTTGTCAGTAGAGACCAAGATCAAATGAAGGCTGCAATATGCACCTTGGATGGTATAATAGACACTGTTTATGCAGTTCATCCTCTGATGCCCTTGATTGATCTATTGAAGTCTCATGGGAAACTGGTGGCAGTTGGGGCACCAGAGAAGCCTCTGGAGTTGCTACTCCCCACTTTAATTTTGGGGAGAAAAAGTGTAGCAGGTAGTTACATTGGAGGAATGAAGGAGACACAAGAAATGATTGATTTCGCTGCTGAACACAATATTAGACCAGAAATTGAAGTAATTCCAATGGATTATGTGAACACGGCAATGCAGAGACTAGTGAAAGCTGATGTTAAATATCGATTTGTGATTGACATTGGAAACACATTGAAGCCCTAG 1080 0.4444 MAVQPEVEHPRKAYGWAARDTSGVLSPFLFSRRKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVEKFKVGEKVAVGCLVGSCHSCQNCVNNLENYCQKAIPTYGAKYVDGSITYGGFSDFMVADEHFVVSIPNGLPLDAAAPLLCAGITVYGPLRYFGLDKPGLHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPNKKEEAIQHLGADSFLVSRDQDQMKAAICTLDGIIDTVYAVHPLMPLIDLLKSHGKLVAVGAPEKPLELLLPTLILGRKSVAGSYIGGMKETQEMIDFAAEHNIRPEIEVIPMDYVNTAMQRLVKADVKYRFVIDIGNTLKP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00390 359 Gene3D - 167 323 - -
Phac3g00390 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Phac3g00390 359 Gene3D - 16 353 - -
Phac3g00390 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Phac3g00390 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Phac3g00390 359 FunFam Uncharacterized protein 16 166 - -
Phac3g00390 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Phac3g00390 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Phac3g00390 359 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Phac3g00390 359 CDD CAD1 15 352 IPR047109 GO:0016616
Phac3g00390 359 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Phac3g00390 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00390 Phac-Chr3 2764492 2768023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00390 11 359 Monolignol Biosynthesis Gene Families AT4G37990 70.201 1.10e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00390 K23232 - gmx:100812491 649.818