Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00381 ATGAAAAATATGCAAGGCTTCAAGACAGCACAACCAAGTTCACAACTCTACTGCCACTCTTCCTTTTTGCTTCGGGGAAATGACGCCAACCGAAACCCAACCACCGGGTTATGTGATCTTGGGGACCTTCACCATTCCTCTGCCGTTTTTCATCAAGAACATGGTGTTGATTTAGGCTCAAGTTCTATGTATAGTGTGAAGTCAAACAATGTTGTTGGTGGCAGTAACATGCAATATGGGACATTGAGCACGAATGTTGGGTCTTCGGAGATTGGTTCAAGTGGGGGAGGGTGCATGGATACAGGGCTGCAACTGATGTACCACAAAGGAGTGGCTATGCCTACCTTGCCTTTGGGGAATGGTCATGTTGACAATTGGGCTGATTCAGGCATAGCGGATAATAGCCAGCATACTGATGATACTTCCACAGATATTGACACTGATGATAGAATCCAATGCAATAGAGTTAAGAATGGTTCGCGTATGGTTATGCACTCCAAGGATAAGACAAAGCTCAAACCTGAAGATCAGAAGACCCTTCGTAGACTGGCTCAGAATCGGGAGGCAGCAAAGAAGAGTCGGTTAAGGAAAAAGGCATATGTACAGCAATTGGAGAACAGCCGAGTCAAGCTTGTTCAATTAGAGCAAGAGCTTCAACAAGCACGTCAGCAGGGTATATGTATTGCGGCTGAAGGGGATCAGGGTCGTTTGGCTGTTGGAAATGGTGCCTTAGCATTTGACATGGACTATGCTCACTGGGTGGATGAACACCAACGTCTGCTCAATGATCTAAGATTGGCTATAAATTCTCAAATGAGTGATGATGAGTTACATATCCTTGTTGAAGGTGTCATGGCACATTATAATGACTTATTTAGGTTAAAGAGAATAGGAGCAAAGGCTGATATATTTCACATACTTTATGGAATGTGGAAAAGTCCAGTAGAAAGACGTTTTATGTGGCTTGGTGGATTCCGTTCATCTGAACTACTCAAGATCATCATGAACCACCTTGAGCCATTGACAGAGCAGCAGTTGTTTGGCATTTGTACTTTGCAAAAATCTTCTCACCAGTCTGAGGATGCTTTAGATCAAGGCATGGAAGCATTGCAGCAATATCTTGTAGAAACACTTTCCTCCACCTCCCTAGGACCCACTGGTTGTGGAAATGTTGCTGATTACATGGGCCAAATGGCTCTTGCAATGGGCAAGCTTGGTGAGCTGGAGGGTCTCCTTCATCAGGCTGATCTCTTGAAGCAACATACTCTTCAACGGTTGCAACAAATTTTGACGACACGCCAAACCGCCCGAGCACTCCTTGTCCAAAATGATTTCATTTCAAGACTAAGAGCACTTAGTTCATTATGGTTGGCACGCCCTAGAGAATAG 1389 0.4442 MKNMQGFKTAQPSSQLYCHSSFLLRGNDANRNPTTGLCDLGDLHHSSAVFHQEHGVDLGSSSMYSVKSNNVVGGSNMQYGTLSTNVGSSEIGSSGGGCMDTGLQLMYHKGVAMPTLPLGNGHVDNWADSGIADNSQHTDDTSTDIDTDDRIQCNRVKNGSRMVMHSKDKTKLKPEDQKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVKLVQLEQELQQARQQGICIAAEGDQGRLAVGNGALAFDMDYAHWVDEHQRLLNDLRLAINSQMSDDELHILVEGVMAHYNDLFRLKRIGAKADIFHILYGMWKSPVERRFMWLGGFRSSELLKIIMNHLEPLTEQQLFGICTLQKSSHQSEDALDQGMEALQQYLVETLSSTSLGPTGCGNVADYMGQMALAMGKLGELEGLLHQADLLKQHTLQRLQQILTTRQTARALLVQNDFISRLRALSSLWLARPRE* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00381 462 SMART brlzneu 174 243 IPR004827 GO:0003700|GO:0006355
Phac3g00381 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Phac3g00381 462 Gene3D - 177 227 - -
Phac3g00381 462 Pfam bZIP transcription factor 177 218 IPR004827 GO:0003700|GO:0006355
Phac3g00381 462 Coils Coil 197 231 - -
Phac3g00381 462 MobiDBLite consensus disorder prediction 129 148 - -
Phac3g00381 462 PANTHER TRANSCRIPTION FACTOR TGA9 125 462 - -
Phac3g00381 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 220 IPR004827 GO:0003700|GO:0006355
Phac3g00381 462 SUPERFAMILY Leucine zipper domain 178 221 IPR046347 GO:0003700|GO:0006355
Phac3g00381 462 Pfam Seed dormancy control 261 335 IPR025422 GO:0006351|GO:0043565
Phac3g00381 462 FunFam BZIP family transcription factor 177 226 - -
Phac3g00381 462 ProSiteProfiles DOG1 domain profile. 243 459 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00381 Phac-Chr3 2717876 2723000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00381 7 462 bZIP Transcription Factor Family AT1G68640 52.128 1.25e-152 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac3g00381 DOG1 1.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00381 K14431 - gmx:100777181 697.582