Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00367 ATGCTTCCCCGCAAAATGGGGTTCCGTGAGTACATCGAAGCATTGGAGGAAGAAAGGAGGAAAATTCAAGTTTTCCCCAAAGAGCTTCCTCTGTCGTTGGAGCTTGTCACGCAAGCAATTGAGGGGTGTAGGCAGCAATTGTCTGGAACGGTTACGGAGTACAATTTGAATGGCCAATCGGAGTGTTCGGAGCAGACGTCAACGGATGAAGGACCTGTTTTTGAGGAGTTCATTCCTATTAAGAAAATGGCATCTCAAGATTCTGTTGAAGAAGAAGAAGAAGAAGAAAATGAAGATGAAGTTGAAGATGAGCAACATTCTCATCACCACAGGAAAACCACTTCTGATAAAAAGAAATCAGATTGGCTTAGATCTGTTCAGTTGTGGAATCCTAATCCCCCTCCTACCAAAGAGGATGTGCCTAGAAAAGCTAATGTTGTTGAAGTGAAGAGAAACGGTGGAGCTTTTCAACCGTTCCAAAGAGAGGAAAAGAGTGGTGTAGTTGATGGAAAGGTTAATAATTATGCATCAGCAATTGGTAAAGCACCCTCTTCACCACCAGTGCCTGCTACAAGTTCCACAGGACCAGTGAGAATAGACAGCAAAAAAGAGGAGAAAGGACAGGCTCAGAGAAAGCAACGCCGGTGTTGGTCACAGGAATTGCACAAGCGATTCTTGCATGCACTTCAACAACTTGGAGGTGCAGATTCTGCCACGCCCAAACAGATCAGGGAGCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGCCATTTACAGAAATTTCGTCTGCACACTAGAAGAAGTCCCATAATGCACAACAACGCAAGTTCACAAGCAGCCCCTTTGTTTCTTGTGGGGAACATTTTTGTGCAGCCACCAGAATATGGTGCAGTAGCTACCTCATCAGCTTCTGGAGGAGAATTGACCACAGTTACTGCTCCAACTGGAATATATGCACCAGTGGCTGCACACCCTCCACCTGTCACAAACACACCAACAATGAAGCATTTGCATTCTCAAGAAAGGCCTCATAATCACAGTGCTCAATCAAACTCACCTGCCTCATCATCTTCCACACACACCATCACAACTACTTCATGTGCCCCTTGA 1119 0.4513 MLPRKMGFREYIEALEEERRKIQVFPKELPLSLELVTQAIEGCRQQLSGTVTEYNLNGQSECSEQTSTDEGPVFEEFIPIKKMASQDSVEEEEEEENEDEVEDEQHSHHHRKTTSDKKKSDWLRSVQLWNPNPPPTKEDVPRKANVVEVKRNGGAFQPFQREEKSGVVDGKVNNYASAIGKAPSSPPVPATSSTGPVRIDSKKEEKGQAQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIMHNNASSQAAPLFLVGNIFVQPPEYGAVATSSASGGELTTVTAPTGIYAPVAAHPPPVTNTPTMKHLHSQERPHNHSAQSNSPASSSSTHTITTTSCAP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00367 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 346 IPR044787 GO:0003700|GO:0006355
Phac3g00367 372 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 267 IPR006447 GO:0003677
Phac3g00367 372 MobiDBLite consensus disorder prediction 102 123 - -
Phac3g00367 372 MobiDBLite consensus disorder prediction 198 215 - -
Phac3g00367 372 MobiDBLite consensus disorder prediction 324 372 - -
Phac3g00367 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 269 IPR017930 -
Phac3g00367 372 MobiDBLite consensus disorder prediction 347 372 - -
Phac3g00367 372 Gene3D - 211 269 - -
Phac3g00367 372 MobiDBLite consensus disorder prediction 178 215 - -
Phac3g00367 372 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Phac3g00367 372 Pfam Myb-like DNA-binding domain 214 263 IPR001005 -
Phac3g00367 372 MobiDBLite consensus disorder prediction 84 142 - -
Phac3g00367 372 FunFam Myb family transcription factor 211 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00367 Phac-Chr3 2592015 2594683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00367 10 330 G2-like Transcription Factor Family AT1G68670 47.929 4.09e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g00367 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00367 - - gmx:100819750 562.762