Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00366 ATGCAAACTCACCCTTTCTCCTACATACCCTCCTGTCATGGTAGCAGTGCCTTCTTGGAACCTCATCATCATCAGGAGGCTGTGGATGAAGCCTCCATCTCCCTCTCTCTTGGCCCTCCTGGCCAACAACACAACCCCAAAGGCACTTCCTCCTCCTCCTCCTCCTCCTCCACTCTGCACCATTATCGGCATAACCCTACCTCTGATGACCAGAGAGGTGTAACTGTGGCTCTTCACATTGGCCTTCCCAATCCCACCACTTCACCAAACAGTCCCACCCCCATTAGCAAGCCTGATCTTCATCTGACCTCCACTCCCATTCAGGGCCAGTACTGGATCCCTTCTCCGGCTCAAATCCTCATTGGACCCACCCAGTTCTCCTGCACTGTCTGCAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCACATGTGGGGACACGGTTCACAATATAGGAAAGGACCTGAATCCCTGAGAGGAGCAAAACCAGCTTCTTCAATGCTGAGGCTTCCCTGCTATTGTTGTGCTGAGGGTTGCAAAAACAACATAGACCATCCAAGGTCTAGGCCACTGAAGGATTTCAGAACCCTTCAGACTCACTACAAGAGGAAGCATGGAGCAAAGCCTTTTGGGTGCAGAAAGTGTGGCAAACCTTTTGCTGTGAGAGGGGATTGGAGGACACACGAGAAAAACTGTGGGAAGCTTTGGTTCTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCCCTCAAAGACCATGTTCGTGCCTTTGGTGATGGCCACGCTCCACACACTGTGGAGAGTTGTGATCAGATTGGGGAGGATGACTTGTTTGGTGATGAAGATGAAGAGGAACTAGATTTAGAAGATGATGATGATGATGATGAAGGTTATAACAGTAATCAAGTGGTTTTTTCTTTTAATTAA 930 0.4882 MQTHPFSYIPSCHGSSAFLEPHHHQEAVDEASISLSLGPPGQQHNPKGTSSSSSSSSTLHHYRHNPTSDDQRGVTVALHIGLPNPTTSPNSPTPISKPDLHLTSTPIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQIGEDDLFGDEDEEELDLEDDDDDDEGYNSNQVVFSFN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00366 309 MobiDBLite consensus disorder prediction 281 299 - -
Phac3g00366 309 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 153 IPR013087 -
Phac3g00366 309 SUPERFAMILY beta-beta-alpha zinc fingers 122 147 IPR036236 -
Phac3g00366 309 MobiDBLite consensus disorder prediction 281 309 - -
Phac3g00366 309 MobiDBLite consensus disorder prediction 35 71 - -
Phac3g00366 309 ProSitePatterns Zinc finger C2H2 type domain signature. 128 148 IPR013087 -
Phac3g00366 309 SUPERFAMILY beta-beta-alpha zinc fingers 194 231 IPR036236 -
Phac3g00366 309 Gene3D Classic Zinc Finger 168 257 - -
Phac3g00366 309 MobiDBLite consensus disorder prediction 36 62 - -
Phac3g00366 309 PANTHER ZINC FINGER PROTEIN WIP2 20 281 IPR043584 GO:0003700|GO:0010468
Phac3g00366 309 FunFam Zinc finger protein WIP2 180 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00366 Phac-Chr3 2559145 2561119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00366 29 267 C2H2 Transcription Factor Family AT1G13290 72.917 2.94e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g00366 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00366 - - aprc:113870355 511.916