Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00356 ATGGCCTCTGTTGCAACTACAGGAATTGGTGTAGGAGTGACAAAGCTCCAACAGCTCGAAAAACCAAAGAACAAGTCCTTGTTTCTTGGCCAGAGGCTTAGGATTAGACCCTCTGGGCAGGCTCAATGCAGTGCAAGATTCAATGTCTCAACCCCTAGAGTGGTTCAAGTTTTTGCACTAGGGGGTGAATGGATTGACACAGTTCACAACCTTTTTGTGGGTGTTGGGGTTGGACTTCCTTGTAGTGTGATGCAGTGTGGGGATGTAATCTATAGGAGCACTCTTCCCAAGTCCAATGCCTTGACACTCACTGTCCCTGGGGTGATTCTGGCTTTGGGGACTCTATCTTACCTTTGGGCCACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTTCTTGCCTTTGTTGAGAGGTTCTTCCGACCCAGTTACAAGAAGGATGATTTTGTTCTGGGGAAGAAGTTGGGGGAGGGATCATTTGGAGTGGTTTATCGAGTGTCACTGGCCAACAAACCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAGGCGACTGAATATGGTGCTGTTGAAATTTGGATGAATGAGCGTGTACGAAGAGCTTGTGCAAGCAGCTGTGCAGATTTTGTCTATGGTTTTCTTGAGAGCTCTTCCAAGAAATCTGCTGCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGGTGCAGAGTAGGGAATTTCCATATAATGTTGAAACATTAATTTTGGGTGAGGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATTATTCAGACAATCATGAGACAAATATTGTTTGCACTGGATGGTCTTCATTCAACTGGTATTGTGCATAGGGACATTAAGCCACAGAACATTATTTTCTCCGAAGAGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTACAGACCTGCGAGTGGGCATAAACTACATTCCAAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCTTCAGCACCCTCAGTTCCAGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCAGACAGATTTGACATCTATAGTGCTGGTTTAATCTTTCTTCAAATGGCCTTCCCTGGTCTACGGTCTGATAATAGCCTCATTCAATTCAACCGACAATTAAAGAGGTGTGACTATGACATAGTTGCCTGGAGAAAAAGTTTAGAGCCTAGATGCAGCCCTGAACTGAGGAGGGGTTTTGAGATGTTGGATTTGGATGGTGGAATAGGATGGGAACTTCTAAAATCAATGGTAAGGTACAAAGCAAGACAAAGGCTGAGTGCCAAAGCAGCATTGGCTCATCCTTACTTTGACAAAGAAGGCTTGATGACATTGTCTTTCATGCAAACACTGAGGCTGCAGCTCTTGCGTGCAACTCAGCAGGACTATGGAGAAGCTGCCAAGTGGATTACTAATCTAATGGCAAAATCAGGGACACAAAAAGATGGTGGATTCACTGAGGCTCAACTTCAGGAACTGAGAGAAATTGAACCCAAAAAGAAGGCTAATGCACCAAGAAATGCTCTTGCTTCAGCTCTTAAACTTCAGAGGAAACTTTTAAGAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCTTTTGGTGGAGCAGATGGATCCCAAGAGAAGAATGA 1740 0.4437 MASVATTGIGVGVTKLQQLEKPKNKSLFLGQRLRIRPSGQAQCSARFNVSTPRVVQVFALGGEWIDTVHNLFVGVGVGLPCSVMQCGDVIYRSTLPKSNALTLTVPGVILALGTLSYLWATPGVAPGFFDMFVLAFVERFFRPSYKKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKSAAEYWLIWRFEGDATLADLVQSREFPYNVETLILGEVQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNSLIQFNRQLKRCDYDIVAWRKSLEPRCSPELRRGFEMLDLDGGIGWELLKSMVRYKARQRLSAKAALAHPYFDKEGLMTLSFMQTLRLQLLRATQQDYGEAAKWITNLMAKSGTQKDGGFTEAQLQELREIEPKKKANAPRNALASALKLQRKLLRTLNESMDELNRRRKSFWWSRWIPREE* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00356 579 Coils Coil 545 565 - -
Phac3g00356 579 Gene3D Phosphorylase Kinase; domain 1 137 231 - -
Phac3g00356 579 ProSiteProfiles Protein kinase domain profile. 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00356 579 Pfam Protein kinase domain 152 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00356 579 SUPERFAMILY Protein kinase-like (PK-like) 135 472 IPR011009 -
Phac3g00356 579 Gene3D Transferase(Phosphotransferase) domain 1 260 475 - -
Phac3g00356 579 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 57 554 - -
Phac3g00356 579 SMART serkin_6 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00356 579 FunFam Serine/threonine-protein kinase STN7, chloroplastic 260 474 - -
Phac3g00356 579 CDD STKc_SNT7_plant 154 469 - -
Phac3g00356 579 ProSitePatterns Protein kinases ATP-binding region signature. 156 183 IPR017441 GO:0005524
Phac3g00356 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00356 Phac-Chr3 2438068 2444861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00356 269 470 Core Cell Cycle Gene Families AT2G38620 30.516 1.52e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Phac3g00356 Pkinase 3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00356 - - gmx:100778588 1033.48