Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00355 ATGGCCTCTGTTGCAACTACAGGAATTGGTGTAGGAGTGACAAAGCTCCAACAGCTCGAAAAACCAAAGAACAAGTCCTTGTTTCTTGGCCAGAGGCTTAGGATTAGACCCTCTGGGCAGGCTCAATGCAGTGCAAGATTCAATGTCTCAACCCCTAGAGTGGTTCAAGTTTTTGCACTAGGGGGTGAATGGATTGACACAGTTCACAACCTTTTTGTGGGTGTTGGGGTTGGACTTCCTTGTAGTGTGATGCAGTGTGGGGATGTAATCTATAGGAGCACTCTTCCCAAGTCCAATGCCTTGACACTCACTGTCCCTGGGGTGATTCTGGCTTTGGGGACTCTATCTTACCTTTGGGCCACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTTCTTGCCTTTGTTGAGAGGTTCTTCCGACCCAGTTACAAGAAGGATGATTTTGTTCTGGGGAAGAAGTTGGGGGAGGGATCATTTGGAGTGGTTTATCGAGTGTCACTGGCCAACAAACCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAGGCGACTGAATATGGTGCTGTTGAAATTTGGATGAATGAGCGTGTACGAAGAGCTTGTGCAAGCAGCTGTGCAGATTTTGTCTATGGTTTTCTTGAGAGCTCTTCCAAGAAATCTGCTGCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGGTGCAGAGTAGGGAATTTCCATATAATGTTGAAACATTAATTTTGGGTGAGGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATTATTCAGACAATCATGAGACAAATATTGTTTGCACTGGATGGTCTTCATTCAACTGGTATTGTGCATAGGGACATTAAGCCACAGAACATTATTTTCTCCGAAGAGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTACAGACCTGCGAGTGGGCATAAACTACATTCCAAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCTTCAGCACCCTCAGTTCCAGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCAGACAGATTTGACATCTATAGTGCTGGTTTAATCTTTCTTCAAATGGCCTTCCCTGGTCTACGGTCTGATAATAGCCTCATTCAATTCAACCGACAATTAAAGAGGTGTGACTATGACATAGTTGCCTGGAGAAAAAGTTTAGAGCCTAGATGCAGCCCTGAACTGAGGAGGGGTTTTGAGATGTTGGATTTGGATGGTGGAATAGGATGGGAACTTCTAAAATCAATGGTAAGGTACAAAGCAAGACAAAGGCTGAGTGCCAAAGCAGCATTGGCTCATCCTTACTTTGACAAAGAAGGCTTGATGACATTGTCTTTCATGCAAACACTGAGGCTGCAGCTCTTGCGTGCAACTCAGCAGGACTATGGAGAAGCTGCCAAGTGGATTACTAATCTAATGGCAAAATCAGGGACACAAAAAGATGGTGGATTCACTGAGGCTCAACTTCAGGAACTGAGAGTTTGTATCTTAATTCTGTGA 1599 0.4453 MASVATTGIGVGVTKLQQLEKPKNKSLFLGQRLRIRPSGQAQCSARFNVSTPRVVQVFALGGEWIDTVHNLFVGVGVGLPCSVMQCGDVIYRSTLPKSNALTLTVPGVILALGTLSYLWATPGVAPGFFDMFVLAFVERFFRPSYKKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKSAAEYWLIWRFEGDATLADLVQSREFPYNVETLILGEVQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNSLIQFNRQLKRCDYDIVAWRKSLEPRCSPELRRGFEMLDLDGGIGWELLKSMVRYKARQRLSAKAALAHPYFDKEGLMTLSFMQTLRLQLLRATQQDYGEAAKWITNLMAKSGTQKDGGFTEAQLQELRVCILIL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00355 532 ProSiteProfiles Protein kinase domain profile. 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00355 532 SMART serkin_6 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00355 532 CDD STKc_SNT7_plant 154 469 - -
Phac3g00355 532 ProSitePatterns Protein kinases ATP-binding region signature. 156 183 IPR017441 GO:0005524
Phac3g00355 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Phac3g00355 532 FunFam Serine/threonine-protein kinase STN7, chloroplastic 260 474 - -
Phac3g00355 532 Gene3D Transferase(Phosphotransferase) domain 1 260 475 - -
Phac3g00355 532 Pfam Protein kinase domain 152 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00355 532 Gene3D Phosphorylase Kinase; domain 1 137 231 - -
Phac3g00355 532 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 57 486 - -
Phac3g00355 532 SUPERFAMILY Protein kinase-like (PK-like) 135 472 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00355 Phac-Chr3 2438068 2444861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00355 269 470 Core Cell Cycle Gene Families AT2G38620 30.516 2.57e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Phac3g00355 Pkinase 2.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00355 - - gmx:100810714 936.021