Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00353 ATGGCTGGACCTTCGTGGTTGGTGGACAAAAGTAGAATTGCGACCAAAATAAAATGTGCATCAGGAACGTGTGATCCTAAGCAGATTATATGGAACAGCAATCCTACCAAGCCTTGCCCAAATTGTCAACATGATATTGACAACAGTGATGTAGCACAAGAGTGGCCTGGCTTACCGAAAGGTGTCAAATTTGATCCATCTGATCAAGAGATAATCTGGCACTTGCTTGCAAAAGTCGGGGTAGAAGATTCTAAACCTCATCCTTTCATTGATGAATTTATTACTAATCTTGAAGAAGATAATGGAATTTGCTATACTCATCCTCAAAATTTACCTGGTATTAAGCAAGATGGAAGTGCTTCCTTCTTTTTCCATAGAGCAATCAAGGCTTACAACACTGGCAACCGAAAGCGTAGAAAAATAACAAGTCAAGATTTTGGTGATGCCCGCTGGCACAAGACTGGAAGGACTAAACCGATTGTCTTGAATGGGGGTCAAAAAGGCTGGAAAAAGATTATGGTTCTGTATGAAAACAACGGAAGAGGAGGAAAAGTTGAAAAAACTAATTGGGTTATGCATGAATATCACCTGGGAACAAAAGAAGATGAACATGATGGGGAGTACATTTTCTCTAAAGTGTTTTACCAACAACAAGTCAAATTGGGTGATAAAGATGACCAAGATGTTCCTGAAGCAATCGAAACAACCATTGTGGAGGTGGTTCCACACACTCCTAACTTAGTGACTCTTGATGCTCTTTGCAATGAAAGGCAGAGTGCAGATCTAGACCAAGGACAAGAAACGCATGACATTCCACAGCTGTCTCAGATGGATTGTTTATATGAAATTGAAGAGGATTACCAAGAACTTGCAACTGAATCTCAGCATAATGAAGGGGTGGATAATAAAGAAAGTAATGCTGAGGAAGGCCAAAAATGGTGGGACAGTGAGTCACAGAATCTGTTGGATTCACAACAACTGGTTGACGCTCTGTCTTTGTGTGACGATCTCCTCCACAGCCAGTCTCCCAGTAGAGATGGAAAACATGAAGATCATAAGAACAATCCTGGTCTTTCTGTTTATGCTCAGCTAGGACCAGAATGTCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGTCCATGATCCTGCAAATATAGAGAATGATACCTCTTCTGAGTTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGATAGCTTTATTTCCTGGGGATACAAGGCAGTGAACTAA 1251 0.4077 MAGPSWLVDKSRIATKIKCASGTCDPKQIIWNSNPTKPCPNCQHDIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGVEDSKPHPFIDEFITNLEEDNGICYTHPQNLPGIKQDGSASFFFHRAIKAYNTGNRKRRKITSQDFGDARWHKTGRTKPIVLNGGQKGWKKIMVLYENNGRGGKVEKTNWVMHEYHLGTKEDEHDGEYIFSKVFYQQQVKLGDKDDQDVPEAIETTIVEVVPHTPNLVTLDALCNERQSADLDQGQETHDIPQLSQMDCLYEIEEDYQELATESQHNEGVDNKESNAEEGQKWWDSESQNLLDSQQLVDALSLCDDLLHSQSPSRDGKHEDHKNNPGLSVYAQLGPECLKKDIEECQNLVHDPANIENDTSSEFRLSQLEFGSQDSFISWGYKAVN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00353 416 MobiDBLite consensus disorder prediction 341 355 - -
Phac3g00353 416 MobiDBLite consensus disorder prediction 290 311 - -
Phac3g00353 416 MobiDBLite consensus disorder prediction 339 359 - -
Phac3g00353 416 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Phac3g00353 416 FunFam NAC domain-containing protein 8 67 220 - -
Phac3g00353 416 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Phac3g00353 416 MobiDBLite consensus disorder prediction 290 313 - -
Phac3g00353 416 Gene3D NAC domain 67 220 IPR036093 GO:0003677|GO:0006355
Phac3g00353 416 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 377 IPR044799 GO:0003700
Phac3g00353 416 SUPERFAMILY NAC domain 44 216 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00353 Phac-Chr3 2409456 2414360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00353 23 220 NAC Transcription Factor Family AT1G28470 53.922 3.51e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g00353 NAM 1.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00353 - - gmx:100799488 711.449