Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00352 ATGGCCTCAAAACATGTATATTGTAGCATTGAGGTGACTCTGATGGTAGTTTTTCTAACACTCCAGGTTGTGTTATCTGATGATACACCAATGCCTTCTGATAAGACACAATTAGGGTCATGGTTTGAAAGTAATGTAGGGACTTTAAGGAAAAGAAAGGGCACCCTGGACCCTAAATTAGTGGCTGCTGAAGAAGGTGGCAAGGTTGTGAAGGTAATGCAAGATGGCAGTGGGGAATACAAGAGCATCAGTGATGCCCTTAAAAGCATACCTTCAGGGAACACCAAGCGTGTGATTTTGTATATTGGACCAGGAAATTACCATGAGAAAATCACTGTTGAGAAGACAAAACCTTTCGTCACCTTCTATGGGAAACCAGGGAACATGCCAAACTTGACCTATGACGGCACGGCAAGAAAATATGGCACTGTTGATAGTGCCACATTGATTGTTTTATCAGACTACTTTGTGGCAGCCAACATCATAATCTCGAACTCTGCACCAAGACCTGATGCAAACACTGTAGGAGGTCAAGCAGTTGCATTACGAATTTCTGGAGACAAGGCTACATTTTATAACTGTCAGCTATATGGGTACCAAGACACATTGTTGGATGATGCAAATAGACATTTTTTCAAAGACTGCTTGATTCAAGGATATGTTGATTATATTTTTGGAAGTGGAAAGTCACTATATGTGAATTGCGAACTAAGAACGCTTGGCGATGAAGGGTTTACTTTTATAACAGCACAAGCAAGAAAAAATATGCAAGAGGACAATGGCTACTCCTTTGTACATTGTGAACTTACTGGAACTGGATCTGATTCTTACTTGGGAAGAGCCTGGTTTGGTTATTCCACATGCAGAACTCTTTATTTTGGGGAGTATAAGAACACAGGACCTGGTTCAGATGGCAGAGGGCGTTCTCCATTGGCAAAGCAACTGAGTGAGTCAGAGGTTAAGGCATACCTAAGTCTTGGTATGATAGAAGGCTCAAAATGGATACTTCCTCCTCCAACTCCCAAACTCTAA 1032 0.4157 MASKHVYCSIEVTLMVVFLTLQVVLSDDTPMPSDKTQLGSWFESNVGTLRKRKGTLDPKLVAAEEGGKVVKVMQDGSGEYKSISDALKSIPSGNTKRVILYIGPGNYHEKITVEKTKPFVTFYGKPGNMPNLTYDGTARKYGTVDSATLIVLSDYFVAANIIISNSAPRPDANTVGGQAVALRISGDKATFYNCQLYGYQDTLLDDANRHFFKDCLIQGYVDYIFGSGKSLYVNCELRTLGDEGFTFITAQARKNMQEDNGYSFVHCELTGTGSDSYLGRAWFGYSTCRTLYFGEYKNTGPGSDGRGRSPLAKQLSESEVKAYLSLGMIEGSKWILPPPTPKL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00352 343 Pfam Pectinesterase 70 287 IPR000070 GO:0030599|GO:0042545
Phac3g00352 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 290 335 - -
Phac3g00352 343 Gene3D - 66 338 IPR012334 -
Phac3g00352 343 SUPERFAMILY Pectin lyase-like 69 338 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00352 Phac-Chr3 2402235 2404155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00352 9 339 Carbohydrate Esterase AT1G69940 49.438 7.53e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00352 K01051 - gmx:100816036 498.819