Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00343 ATGAAAAAGGAATTAGATGATCAAGGACAAAGTTCCTCTCAACCAATCAACAACAATAACAACAACATTCAAACCTACCAAGAGCACCTTCTTTTTCAAGAACAGATGCATCAGCAGCAACAAAACAGTGACATCTTCGGGGCTTCAAGAGGGTTAATGTTCCCTGAAATTACTCCAATCATGCAACCATGGTCCATGCCTCCGGTTCACTCGTTCAACCCGGGTCCGGTTCACTACAACACCACCAACCCGGTCCGAGACCATCATGACCAAGCCTTCATAGTCCCTCCCACACCTTCACCCTATTCAAGCTTCTTCAGCAGAAGGGTCCCTTCTCTTCAATTTGCATACCCTTCTTCTGATCACCACCATCTAAGGATCATTTCTGACACCCTTGGACCCATGGTTCAACCCGGTTCAGCACCCTTTGGACTCCAAACCGAGTTAGGAAAAATGACTGCTCAAGAAATCATGGAGGCTAAGGCTCTTGCTGCATCAAAGAGTCACAGTGAAGCAGAAAGAAGACGTAGAGAGAGAATCAACAACCATCTTGCCAAGCTTCGTAGTTTACTTCCTAACACTACCAAAACAGATAAAGCTTCGCTGCTAGCGGAAGTGATTCAGCACGTGAAGGAGCTGAAGCGCCAAACCTCCCACATAGCGGAAACCAGTGCAGTGCCAACGGAGGCAGACGAGTTGACAGTGGATGCAGCAAACGAGGATGGAAAGTTTGTGATCAAAGCCTCAATGTGCTGTGAAGATAGGTCAGATCTCTTACCAGACCTCATCAAAACGTTGAAGGCCTTGAAGCTCAGAACCCTCAAGGCTGAGATAACCTCGGTTGGTGGGCGTGTGAAGAACGTGTTAGTCATTGCTGGAGACGAAGAAAGTCCAAACACCAATGGAGAACAAAGCATGCAGCAGCAGCAACGACAATATTGTATTACCTCAATACAAGAAACACTCAAAGCAGTGATGGAGAAGAGTGCTGGTGGTGATGAATCAGCTTCTGGGAATGTTAAGCGCCAAAGGACTAATAATATCAATTTCCTTGAACAAAGATCTTTATAA 1071 0.4594 MKKELDDQGQSSSQPINNNNNNIQTYQEHLLFQEQMHQQQQNSDIFGASRGLMFPEITPIMQPWSMPPVHSFNPGPVHYNTTNPVRDHHDQAFIVPPTPSPYSSFFSRRVPSLQFAYPSSDHHHLRIISDTLGPMVQPGSAPFGLQTELGKMTAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSHIAETSAVPTEADELTVDAANEDGKFVIKASMCCEDRSDLLPDLIKTLKALKLRTLKAEITSVGGRVKNVLVIAGDEESPNTNGEQSMQQQQRQYCITSIQETLKAVMEKSAGGDESASGNVKRQRTNNINFLEQRSL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00343 356 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g00343 356 Coils Coil 353 356 - -
Phac3g00343 356 Gene3D - 159 222 IPR036638 GO:0046983
Phac3g00343 356 CDD bHLH_AtAIG1_like 159 237 - -
Phac3g00343 356 Pfam Helix-loop-helix DNA-binding domain 167 213 IPR011598 GO:0046983
Phac3g00343 356 CDD ACT_UUR-ACR-like 251 326 - -
Phac3g00343 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Phac3g00343 356 FunFam transcription factor bHLH30 159 222 - -
Phac3g00343 356 PANTHER TRANSCRIPTION FACTOR BHLH30 40 349 IPR045847 GO:0003700|GO:0006355
Phac3g00343 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 220 IPR036638 GO:0046983
Phac3g00343 356 SMART finulus 170 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00343 Phac-Chr3 2384469 2389088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00343 21 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 54.918 4.72e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g00343 HLH 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00343 - - gmx:100779653 483.796