Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00338 ATGGAAACCCTTCAAGAAGATGAACCCACCGCTGACCCTGAATCCGAAGCCCTCACATTCGAACTCCACGCCGCTGACGACCAACCCGACTCCGACGTCTCCTACGGCCTCAACCTCCGCACGGACAAAAAAAGTGAGCAGAACTATGGTACCGCACTTCCGCCGCCGTCGCGCCGCGTTCCGGTGGAGAGCACGATGCTGCAGAAGCTGAAGGACGACCTGCTGAGGCTACCGGAGGACAAGGGGTTCGACGAATTCAAGGATGTCCCCGTCGAGGGTTTTGGCGCTGCGCTGCTAGCTGGGTACGGGTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTGAAGGTTGTGGAGATCAAAAGGCGAACTGCTAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGGAGCAACAATGACAAGGACAACAAGGACAAGGAGAAGAATGAGAAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCTGAAGGGTAGTGTTGTGTCTAGGATTGAGGATGATTATATTGTTTTGGAGCTATCCAGGAGTGGAGAGAAGGTGAAGGTGAAGGTGGGCGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTCTGAGGAAATTGAAGGAGTCGAAGACTCAGCGTGAGGATAGAGGGCCAAAGAGGAAGCAAGACAGGAATGAGGTGGAGGAGAATCGATTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGGTCGCAGGGATGTGATTGAGAAGAGAACGGATGGTGGTAGGAGAGAGGAGAGGAGAGTGGTGGATCATAGGAAGGTTTCTTGGCTTACTAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCTATTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAAAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGAATTTCTGGAGACTGCTATTCCGAAACGTGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGGGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACCCATGAACTGCTCAATGTGAATCTTGAACAGATTGCGGAGTATTTAGGGGACCCAAGCTTGTTGGGACATTGA 1215 0.5202 METLQEDEPTADPESEALTFELHAADDQPDSDVSYGLNLRTDKKSEQNYGTALPPPSRRVPVESTMLQKLKDDLLRLPEDKGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVRSNNDKDNKDKEKNEKKEKVVRIVGGRDAGLKGSVVSRIEDDYIVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKESKTQREDRGPKRKQDRNEVEENRLDVSRREERKGVGRRDVIEKRTDGGRREERRVVDHRKVSWLTSHIRVRVISRDLKGGLLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQEFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDREMAIVRDADTHELLNVNLEQIAEYLGDPSLLGH* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00338 404 ProSiteProfiles G-patch domain profile. 91 137 IPR000467 GO:0003676
Phac3g00338 404 MobiDBLite consensus disorder prediction 146 160 - -
Phac3g00338 404 MobiDBLite consensus disorder prediction 34 52 - -
Phac3g00338 404 MobiDBLite consensus disorder prediction 140 160 - -
Phac3g00338 404 MobiDBLite consensus disorder prediction 22 60 - -
Phac3g00338 404 SMART kow_9 157 184 IPR005824 -
Phac3g00338 404 SMART kow_9 343 370 IPR005824 -
Phac3g00338 404 SMART G-patch_5 89 135 IPR000467 GO:0003676
Phac3g00338 404 MobiDBLite consensus disorder prediction 219 250 - -
Phac3g00338 404 Gene3D - 289 343 - -
Phac3g00338 404 Coils Coil 142 162 - -
Phac3g00338 404 PANTHER G PATCH AND KOW-CONTAINING 6 400 IPR045166 GO:0000398
Phac3g00338 404 Pfam G-patch domain 78 134 IPR026822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00338 Phac-Chr3 2348146 2351137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00338 280 377 C2H2 Transcription Factor Family AT1G55460 32.653 1.46e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00338 K13101 - gmx:100784934 560.066