Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00318 ATGGCGCCGAAGAAGCCGAGAAGCACGTCGAGGAACCCTGAACTCATCAGGGGTATTGGGAAGTACTCCAGGTCCCAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCAAAAAATGGTGGCGCTTTCCCTCGCCACGATCCCAAGCCCAAACCCGACGCCCCGGCGCAGAAGCCTCCCAAGTTTTACCCCGCCGACGATGTCAGGAAGCCTCTCGTCAACAAGCATAAGCCCAAGCCCGCCAAACTCAGGGCTAGCGTTACTCCAGGAACAGTGTTGATCCTACTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTTCTCAAGCAGCTTCCATCTGGTTTGCTTCTTGTAACAGGTCCCTTTAAGATCAACGGTGTTCCTCTAAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTGGACATCTCTGGTGTTAATGTGGATAGATTTGATGACAAGTACTTTGCCAAGGATGCCAAGAAGAAGAAAACTAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATACGCTTCCCCAAGAGAAGAAAGATGACCAGAAAACCGTGGACTCTGCTTTGTTAAAGGCAATTGAGAGTGTTCAAGACCTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAAGCAGGAATGAAGCCCCATGAACTAGTCTTCTAG 699 0.4936 MAPKKPRSTSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGAFPRHDPKPKPDAPAQKPPKFYPADDVRKPLVNKHKPKPAKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDRFDDKYFAKDAKKKKTKGEGEFFEAEKEEKNTLPQEKKDDQKTVDSALLKAIESVQDLKSYLGARFSLKAGMKPHELVF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00318 232 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g00318 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
Phac3g00318 232 CDD KOW_RPL6 80 232 IPR041997 -
Phac3g00318 232 FunFam 60S ribosomal protein L6 86 170 - -
Phac3g00318 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac3g00318 232 Gene3D - 86 170 IPR014722 -
Phac3g00318 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac3g00318 232 MobiDBLite consensus disorder prediction 39 83 - -
Phac3g00318 232 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00318 Phac-Chr3 2248784 2250927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00318 3 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.741 2.28e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00318 K02934 - gmx:100784101 383.645