Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00302 ATGTCGGCAGCGTCGCCGTCTCCGGCGGCATCCACGGCTTCGCCACCGCCACAGACACCACCCTCCTCCAACACTGGTCCCTCACCCTCCAACACCACCACTCCTCCGCCGCAACAAACCCCTTCTTCCACTTCTCCGCCGCAACAACCTGCTTCTCCACCGCCTTCTCCGCCATCTTCTCCGCCGTCATCGCCACCTAGTTCTTCACCTCCCCCCGTGTCTGGAACACCCCCTCCTTTAGTACCTCCACCCTCACCACCGCCGTCTCCGCCGCCAGCTCCGGATGCACCGCCACCGGTGACACCGAGCTCTCCATCTCCACCGCCACCGGTGACATCGAGCTCTCCACCTCCTCCCCCACCATCAGCACCAGTTCCATCAAGAAGCCCTCCGCCACCGCCACCACCATCAAACCCTCCTAATAACACATCTCCACCACCGTTACCACCACCCCCACAACCATCACCATCAGCGCCACCACCTAAGAACACCCCACCACCACCGCCGCGGGGAAATTCACCACCTCCTCCGGCCACCACGCCGCCACCAGCCTCGCCACCAGGAAATTCACCGCCTGCTCCGGCTGCACCGCCCCCCAGTAACTCAACTAGGTCGCCGCCGCCGGTAAATTCGCCTCCACCAGCAGCGCATGCGCCGCCACCCAGGTCATCGGCGCCGCCAGCACCTGAACCCTCCAACCCTCCTTCTAGCATTAGTCCTCCTCCCACACCAAGTTCCTCACCACCTCCACCTTCAAATTCTACGCCAAGCTCATCACCTCCATCACCACCTTCAGTTACTCCATTGGCCCCGCCACCGCCACCATCGCCCCCATTCCTGCCTCCCAATGGGACATCAGACTCAACCTCTAGTGGAGATGGAATTGGCACTGCTGGTGTAGTGGCTATTAGTGTGGTGGGTGGATTTCTGCTTCTTGGCTTCATCGGTGTTCTTATATGGTGCATGAGGAGGCAAAAGAGAAAGATTCCTGTGAATGGTGGTTATGTCATGCCATCCACTCTGGCCTCATCTCCTGAATCAGATTCATCCTTTTTCAAGACACACTCCTCAGCTCCTCTTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGATCATGGTTTTCATATGAAGAACTAATCAAGGCCACAAATGGTTTCTCAAGTCAAAATCTTTTGGGTGAGGGGGGATTTGGTTGTGTGTATAAAGGGCACCTTCCTGATGGAAGAGAGATAGCAGTGAAAGAACTGAAGATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTGGAAATTATCAGTCGTATACATCATCGCCATTTGGTTTCTTTAGTGGGATATTGCATTGAAGACAACAGAAGACTACTTGTCTATGACTTCGTTTCTAACGATACCCTTTACTTCCATCTACATGGGGAAAGCCAGCCTGTGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCCCGAGGACTAGCTTATCTCCATGAAGACTGCAACCCTCGGATTATTCACAGGGATATCAAGTCTTCAAACATTCTTTTAGATTTCAATTATGAAGCTAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCTAACACACATATTACCACCCGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCTTCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAGCTAATTACCGGACGGAAGCCTGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTACTGAGTCAGGCAATCGATACTGAGGAATTCAATAGTTTGGCAGATCCAAGGCTGGAAAAGAATTATATTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACCAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTACAGCACAGACTTCTTTAGCCGTGCTAGTATGAATCCATGA 2178 0.5142 MSAASPSPAASTASPPPQTPPSSNTGPSPSNTTTPPPQQTPSSTSPPQQPASPPPSPPSSPPSSPPSSSPPPVSGTPPPLVPPPSPPPSPPPAPDAPPPVTPSSPSPPPPVTSSSPPPPPPSAPVPSRSPPPPPPPSNPPNNTSPPPLPPPPQPSPSAPPPKNTPPPPPRGNSPPPPATTPPPASPPGNSPPAPAAPPPSNSTRSPPPVNSPPPAAHAPPPRSSAPPAPEPSNPPSSISPPPTPSSSPPPPSNSTPSSSPPSPPSVTPLAPPPPPSPPFLPPNGTSDSTSSGDGIGTAGVVAISVVGGFLLLGFIGVLIWCMRRQKRKIPVNGGYVMPSTLASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGHSRSWFSYEELIKATNGFSSQNLLGEGGFGCVYKGHLPDGREIAVKELKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNRRLLVYDFVSNDTLYFHLHGESQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDFNYEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSQAIDTEEFNSLADPRLEKNYIESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGSDLTNGMQLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSRASMNP* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00302 725 ProSiteProfiles Protein kinase domain profile. 398 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00302 725 Gene3D Phosphorylase Kinase; domain 1 378 473 - -
Phac3g00302 725 FunFam proline-rich receptor-like protein kinase PERK8 474 685 - -
Phac3g00302 725 Pfam Protein tyrosine and serine/threonine kinase 401 670 IPR001245 GO:0004672|GO:0006468
Phac3g00302 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Phac3g00302 725 PRINTS Proline rich extensin signature 13 29 - -
Phac3g00302 725 PRINTS Proline rich extensin signature 34 46 - -
Phac3g00302 725 PRINTS Proline rich extensin signature 50 71 - -
Phac3g00302 725 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Phac3g00302 725 SUPERFAMILY Protein kinase-like (PK-like) 380 669 IPR011009 -
Phac3g00302 725 MobiDBLite consensus disorder prediction 1 292 - -
Phac3g00302 725 Gene3D Transferase(Phosphotransferase) domain 1 474 684 - -
Phac3g00302 725 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 311 706 IPR047117 -
Phac3g00302 725 FunFam Proline-rich receptor-like protein kinase PERK8 371 473 - -
Phac3g00302 725 MobiDBLite consensus disorder prediction 10 282 - -
Phac3g00302 725 CDD STKc_IRAK 404 674 - -
Phac3g00302 725 SMART serkin_6 398 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00302 Phac-Chr3 2068521 2073541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00302 173 717 Trihelix Transcription Factor Family AT1G70460 50.172 1.32e-168 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac3g00302 PK_Tyr_Ser-Thr 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00302 - - vun:114173712 845.499