Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00279 ATGTTGGCCTTCACTCTTCTACCTTCCTCCAAGCTCCACCCTTCGCACTTCCTTCCACCCGTCGCCGTCGCGGAAGCTCCTCCCAGAAACAGAGTCGCAATCTTTTCCAAATCCACCTCCAAACTCGCTTTCGTTGCCAGGGCCACCAATGACGCTCGTGATGGGGCCGTCGACGCAACCTCTCCGCCGGGTGTTGATGCAATAACAAGTACATCTTCTGGCCTCGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTTGATCGTGACCCTCTGGATAGAGAACAAGCTATAATTGCACTATGGAAATATTCACTCGGTGGAAAGAAGTGTATAGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTCAGATCAGAGTCTAGTTCTGCATGTGAGGCAGCTGCAGGCCTTCTGCGATCATTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAAGAGATAAACAGATTGCTGAGGAAATCTTCCTTGACTTCTGAGGTAAAGGAGCAGAGTTTGACTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGGATTAAAATTTCAAAGACTGAGATTCTGCCTGTAGCTATTAAGTACCTTGAAGATGAGGATATTAAAGTGAAGGAGGCTGCAGGGGGAATTTTGGCAAATTTAGCACTGAGCCGTGTTAACCACAACATAATGGTCGAAGCGGGTGTTATACCAAAATTGGCAAAGTTCTTAACATCTGATCTGGAAGGATCTAAAGTTATCAGGAAGGAAGCGAGGAATGCATTGCTAGAACTTTTTAAGGACAATGATTATAAAATTCTTGTTATGGAGGAAGGCCTGGTTCCTGTGCCATTAATTGGTTCTGCGGCCTTTAAGTCATTCACCCCAGGCTTACATTTGTGGCCCACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCCAAATATGGTGCTTCGGAATTACTTCTTGGATTAAACATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAGGTCAGTGCAATTCTTGGACGAACCCAACAGCAATTCCTTGCTCGTGTTGGAGCTTTAGAAAGGGAAGGAAAGACTATACCTCATTCTGATTCCTCAAATGATCTGAGGTTTACACTTTTACCTTGGACGGATGGTGTTGCTCGTCTAGCACTGATATTAGAACTGGAAGATAAGTCTGCATCAATAAAGGCCGCGGAATCAATTGCCACCGCATGTATCAACGAACATATGCGTATTGCATTCAGGGAGGCTGGAGTAATTAAGAATTTAATAAGGCTTTTGAACTGTGATGACGATGCAGTCCAGTTGGCGGTAACACAAGCTTTGGAAAGGCTGTCTGTTAGCAATATTGTTTGCCAGGTAATTGAAGCTGAAGGGGTTTTAGGTCCTTTGGTTAGTATTTTGAAACGGTCAGGGATAGCTGGAACTATTGTGGAAAAGTCTTTGAGTATACTAGCTCGGATATGTGACCTCAGTAAACAAAAGCAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAAAATGCATATGGTGGAGCAAAAAGTGACTGTGTTTCAACCAGGTTTAGTAGCACTGAACAAACTGTATCAAAAACATACTCAAAAGGAATGACATACTAG 1686 0.4288 MLAFTLLPSSKLHPSHFLPPVAVAEAPPRNRVAIFSKSTSKLAFVARATNDARDGAVDATSPPGVDAITSTSSGLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRKSSLTSEVKEQSLTTLWNLSVDEKLWIKISKTEILPVAIKYLEDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSDLEGSKVIRKEARNALLELFKDNDYKILVMEEGLVPVPLIGSAAFKSFTPGLHLWPTLPDGTEIERTSRQPSKYGASELLLGLNIDDKNANLEEAKVSAILGRTQQQFLARVGALEREGKTIPHSDSSNDLRFTLLPWTDGVARLALILELEDKSASIKAAESIATACINEHMRIAFREAGVIKNLIRLLNCDDDAVQLAVTQALERLSVSNIVCQVIEAEGVLGPLVSILKRSGIAGTIVEKSLSILARICDLSKQKQLKFYDGPVNGSENAYGGAKSDCVSTRFSSTEQTVSKTYSKGMTY* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00279 561 SUPERFAMILY ARM repeat 83 511 IPR016024 -
Phac3g00279 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Phac3g00279 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Phac3g00279 561 Gene3D - 384 523 IPR011989 -
Phac3g00279 561 Gene3D - 76 301 IPR011989 -
Phac3g00279 561 SMART arm_5 152 194 IPR000225 GO:0005515
Phac3g00279 561 SMART arm_5 428 468 IPR000225 GO:0005515
Phac3g00279 561 SMART arm_5 469 511 IPR000225 GO:0005515
Phac3g00279 561 SMART arm_5 236 279 IPR000225 GO:0005515
Phac3g00279 561 SMART arm_5 110 151 IPR000225 GO:0005515
Phac3g00279 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 38 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00279 Phac-Chr3 1901777 1911408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00279 122 256 U-box Gene Family AT2G23140 33.333 3.88e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00279 - - gmx:100810447 891.723