Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00277 ATGTTGGCCTTCACTCTTCTACCTTCCTCCAAGCTCCACCCTTCGCACTTCCTTCCACCCGTCGCCGTCGCGGAAGCTCCTCCCAGAAACAGAGTCGCAATCTTTTCCAAATCCACCTCCAAACTCGCTTTCGTTGCCAGGGCCACCAATGACGCTCGTGATGGGGCCGTCGACGCAACCTCTCCGCCGGGTGTTGATGCAATAACAAGTACATCTTCTGGCCTCGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTTGATCGTGACCCTCTGGATAGAGAACAAGCTATAATTGCACTATGGAAATATTCACTCGGTGGAAAGAAGTGTATAGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTCAGATCAGAGTCTAGTTCTGCATGTGAGGCAGCTGCAGGCCTTCTGCGATCATTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAAGAGATAAACAGATTGCTGAGGAAATCTTCCTTGACTTCTGAGGTAAAGGAGCAGAGTTTGACTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGGATTAAAATTTCAAAGACTGAGATTCTGCCTGTAGCTATTAAGTACCTTGAAGATGAGGATATTAAAGTGAAGGAGGCTGCAGGGGGAATTTTGGCAAATTTAGCACTGAGCCGTGTTAACCACAACATAATGGTCGAAGCGGGTGTTATACCAAAATTGGCAAAGTTCTTAACATCTGATCTGGAAGGATCTAAAGTTATCAGGAAGGAAGCGAGGAATGCATTGCTAGAACTTTTTAAGGACAATGATTATAAAATTCTTGTTATGGAGGAAGGCCTGGTTCCTGTGCCATTAATTGGTTCTGCGGCCTTTAAGTCATTCACCCCAGGCTTACATTTGTGGCCCACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCCAAATATGGTGCTTCGGAATTACTTCTTGGATTAAACATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAGGTCAGTGCAATTCTTGGACGAACCCAACAGCAATTCCTTGCTCGTGTTGGAGCTTTAGAAAGGGAAGGAAAGACTATACCTCATTCTGATTCCTCAAATGATCTGAGGTTTACACTTTTACCTTGGACGGATGGTGTTGCTCGTCTAGCACTGATATTAGAACTGGAAGATAAGTCTGCATCAATAAAGGCCGCGGAATCAATTGCCACCGCATGTATCAACGAACATATGCGTATTGCATTCAGGGAGGCTGGAGTAATTAAGAATTTAATAAGGCTTTTGAACTGTGATGACGATGCAGTCCAGTTGGCGGTAACACAAGCTTTGGAAAGGCTGTCTGTTAGCAATATTGTTTGCCAGGTAATTGAAGCTGAAGGGGTTTTAGGTCCTTTGGTTAGTATTTTGAAACGGTCAGGGATAGCTGGAACTATTGTGGAAAAGTCTTTGAGTATACTAGCTCGGATATGTGACCTCAGTAAACAAAAGCAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAAAATGCATATGGTGGAGCAAAAAGTGACTGTGTTTCAACCAGGAATGACATACTAGATTCTGTTTTGATTGCACACTTTGTTGAGATTCTGAAGTCCTCTCCTCCCAATTTACAAGAAAAAGCTGCATCTGTGCTTGAGTTTGTGGCATTGATTGACTCAACCCTGTCCCCAATTTCATCTTTGGATATTGAATCTGGTCTCAGTTCTGCTTTTCAGCAAAAGATTTTGAAAATTTCAGGGGACATGGAATCTGATGCAGAAGATCAGTTTTATGAAACATATGCAATTGAATTTGAAGAAGCTGGTCTAGCAATATCTGCAGCATCGCGGTTATTGACAATACTACTCGATTGCGAGCAGTTCCGCAACAAAATAAATGCCCCCCATTTCATTGATTTGCTTCGTGGAATCCTCAGGTCCAATATTCCTCTCCACACCAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTGAGTTCTCTCTCTGGCTCCCTCACCAGTTTCTATCCAATAAATGTGGAAGTTACACTTTATGAGACAATCCCAAGACTTTTAGAACAGATCAAAACTTCATTCTCCCCAGAAGCACAAGAAACTGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTCCACAGACGAAGCTATTATTTCAGAGGGGGCAATAAGTTCATTGGTGAATCTGGTTGAAGAAGGTAGTGACAGGGCTGTTGAAGCAAGCTTGGCAATACTGTACAATCTGAGTATGAACAATGAGAACCATTCAGCACTGGTGGCTGCTGGAGCTGTGCAGGTCTTGAAAAGAATAGTTCTATCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGA 2466 0.4258 MLAFTLLPSSKLHPSHFLPPVAVAEAPPRNRVAIFSKSTSKLAFVARATNDARDGAVDATSPPGVDAITSTSSGLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRKSSLTSEVKEQSLTTLWNLSVDEKLWIKISKTEILPVAIKYLEDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSDLEGSKVIRKEARNALLELFKDNDYKILVMEEGLVPVPLIGSAAFKSFTPGLHLWPTLPDGTEIERTSRQPSKYGASELLLGLNIDDKNANLEEAKVSAILGRTQQQFLARVGALEREGKTIPHSDSSNDLRFTLLPWTDGVARLALILELEDKSASIKAAESIATACINEHMRIAFREAGVIKNLIRLLNCDDDAVQLAVTQALERLSVSNIVCQVIEAEGVLGPLVSILKRSGIAGTIVEKSLSILARICDLSKQKQLKFYDGPVNGSENAYGGAKSDCVSTRNDILDSVLIAHFVEILKSSPPNLQEKAASVLEFVALIDSTLSPISSLDIESGLSSAFQQKILKISGDMESDAEDQFYETYAIEFEEAGLAISAASRLLTILLDCEQFRNKINAPHFIDLLRGILRSNIPLHTKDWVAACLVKLSSLSGSLTSFYPINVEVTLYETIPRLLEQIKTSFSPEAQETAVVELNRIISEGVVDSTDEAIISEGAISSLVNLVEEGSDRAVEASLAILYNLSMNNENHSALVAAGAVQVLKRIVLSNRPHWERALLLLRILQP* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00277 821 Gene3D - 621 819 IPR011989 -
Phac3g00277 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 752 794 IPR000225 GO:0005515
Phac3g00277 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Phac3g00277 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Phac3g00277 821 Gene3D - 384 583 IPR011989 -
Phac3g00277 821 SUPERFAMILY ARM repeat 83 297 IPR016024 -
Phac3g00277 821 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 39 820 - -
Phac3g00277 821 SMART arm_5 539 579 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 152 194 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 428 468 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 741 781 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 469 511 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 236 279 IPR000225 GO:0005515
Phac3g00277 821 SMART arm_5 110 151 IPR000225 GO:0005515
Phac3g00277 821 SUPERFAMILY ARM repeat 416 805 IPR016024 -
Phac3g00277 821 Gene3D - 76 301 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00277 Phac-Chr3 1901777 1911408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00277 122 249 U-box Gene Family AT2G23140 34.375 1.27e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00277 - - vra:106777739 1339.32