Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00263 ATGGAGAGGGATTTTCTGGGTCTGAACTCGAAAGAACCACTGGTTGTAGTGAAGGAAAAGATGAATAATGATAGCGGGTGCAAAGACACAGGTTTCACCAAGGGAATGGTAAAATGGCCCTTCATGAACAAAGTATCTGTTCATCCTCATTTGATGTTTTTGAATACTCCTCAGAAATCTCTCAATCATGATGGACAAGGAGGCATTCATTTTTCCCTGGCACCAGCACTACATGATGTGATTTATATGAATCGCCCTCATGATGTGAAGATGCTTTCAGTTCCCAAGCAAACAATTCCAGTTTCCATGGGACATCCAACCCTAAAGAATCATTTTACAACTGTTGGTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTCAGGGCAATGCCTATTACAGCACCTCATTCAGTTCTTCCTATAGTTGGTGCTGATGCTGCTCCTGGAATGACCAAAACATGTAACTGTGTGAAACCATCTGCATCTGTTCCTAAACTCACCATCTTCTATGCTGGCACTGTGAATGTCTTTGATGATATCTCTCCTGAGAAGGCACAAGCTATCATGTTGATGGCAAGGAATGACTTATCAGCTGCTTCTAATGTGGCAGTGCCTAATGTTGAGGCACCCAGACTGACACTGGCAGGAGGTGATGGTGTGCATGTTAGTAAAACCATACCACTTTCAAGTCCTTTATCTGTTTCTTCAGCACAATCAGTGAGTGGTTCAAGTAGCAGTGATGAATTTCTGGCAGCTAAAACATCTGGAGGTACCCCTTTGTCTGTTAACACAGTGGAGACTCCTAAAGTAGTCAACACAACCACCATGCTGCCATCAGCTGTGCCACAAGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGCTGA 906 0.4371 MERDFLGLNSKEPLVVVKEKMNNDSGCKDTGFTKGMVKWPFMNKVSVHPHLMFLNTPQKSLNHDGQGGIHFSLAPALHDVIYMNRPHDVKMLSVPKQTIPVSMGHPTLKNHFTTVGQNMNASGMKQPLLRAMPITAPHSVLPIVGADAAPGMTKTCNCVKPSASVPKLTIFYAGTVNVFDDISPEKAQAIMLMARNDLSAASNVAVPNVEAPRLTLAGGDGVHVSKTIPLSSPLSVSSAQSVSGSSSSDEFLAAKTSGGTPLSVNTVETPKVVNTTTMLPSAVPQARKASLARFLEKRKES* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00263 301 Pfam Jas motif 284 300 IPR018467 -
Phac3g00263 301 Pfam tify domain 167 194 IPR010399 -
Phac3g00263 301 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 122 300 IPR040390 -
Phac3g00263 301 SMART tify_2 161 196 IPR010399 -
Phac3g00263 301 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00263 Phac-Chr3 1793469 1800400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00263 37 300 Tify Gene Family AT3G17860 35.616 2.10e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g00263 tify 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00263 K13464 - gmx:100799314 348.977