Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00262 ATGAATCGCCCTCATGATGTGAAGATGCTTTCAGTTCCCAAGCAAACAATTCCAGTTTCCATGGGACATCCAACCCTAAAGAATCATTTTACAACTGTTGGTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTCAGGGCAATGCCTATTACAGCACCTCATTCAGTTCTTCCTATAGTTGGTGCTGATGCTGCTCCTGGAATGACCAAAACATGTAACTGTGTGAAACCATCTGCATCTGTTCCTAAACTCACCATCTTCTATGCTGGCACTGTGAATGTCTTTGATGATATCTCTCCTGAGAAGGCACAAGCTATCATGTTGATGGCAAGGAATGACTTATCAGCTGCTTCTAATGTGGCAGTGCCTAATGTTGAGGCACCCAGACTGACACTGGCAGGAGGTGATGGTGTGCATGTTAGTAAAACCATACCACTTTCAAGTCCTTTATCTGTTTCTTCAGCACAATCAGTGAGTGGTTCAAGTAGCAGTGATGAATTTCTGGCAGCTAAAACATCTGGAGGTACCCCTTTGTCTGTTAACACAGTGGAGACTCCTAAAGTAGTCAACACAACCACCATGCTGCCATCAGCTGTGCCACAAGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTATTGAGTGGAGCACCATATAACCTCAACCTCAACAAGAAGTTTGAGAATATGGCAGAGCATAGTGCAACTCTTTCAAACACCAGGGCAAGTGAGGGTGGTGATGCACTATCAACCAAGCAAGGATAA 786 0.4466 MNRPHDVKMLSVPKQTIPVSMGHPTLKNHFTTVGQNMNASGMKQPLLRAMPITAPHSVLPIVGADAAPGMTKTCNCVKPSASVPKLTIFYAGTVNVFDDISPEKAQAIMLMARNDLSAASNVAVPNVEAPRLTLAGGDGVHVSKTIPLSSPLSVSSAQSVSGSSSSDEFLAAKTSGGTPLSVNTVETPKVVNTTTMLPSAVPQARKASLARFLEKRKERVLSGAPYNLNLNKKFENMAEHSATLSNTRASEGGDALSTKQG* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00262 261 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 50 236 IPR040390 -
Phac3g00262 261 SMART tify_2 79 114 IPR010399 -
Phac3g00262 261 Pfam tify domain 85 112 IPR010399 -
Phac3g00262 261 ProSiteProfiles Tify domain profile. 79 114 IPR010399 -
Phac3g00262 261 MobiDBLite consensus disorder prediction 241 261 - -
Phac3g00262 261 Pfam Jas motif 202 226 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00262 Phac-Chr3 1793469 1797535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00262 14 229 Tify Gene Family AT3G17860 39.565 1.26e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g00262 tify 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00262 K13464 - gmx:100799314 307.76