Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00261 ATGGAGAGGGATTTTCTGGGTCTGAACTCGAAAGAACCACTGGTTGTAGTGAAGGAAAAGATGAATAATGATAGCGGGTGCAAAGACACAGGTTTCACCAAGGGAATGGTAAAATGGCCCTTCATGAACAAAGTATCTGTTCATCCTCATTTGATGTTTTTGAATACTCCTCAGAAATCTCTCAATCATGATGGACAAGGAGGCATTCATTTTTCCCTGGCACCAGCACTACATGATGTGATTTATATGAATCGCCCTCATGATGTGAAGATGCTTTCAGTTCCCAAGCAAACAATTCCAGTTTCCATGGGACATCCAACCCTAAAGAATCATTTTACAACTGTTGGTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTCAGGGCAATGCCTATTACAGCACCTCATTCAGTTCTTCCTATAGTTGGTGCTGATGCTGCTCCTGGAATGACCAAAACATGTAACTGTGTGAAACCATCTGCATCTGTTCCTAAACTCACCATCTTCTATGCTGGCACTGTGAATGTCTTTGATGATATCTCTCCTGAGAAGGCACAAGCTATCATGTTGATGGCAAGGAATGACTTATCAGCTGCTTCTAATGTGGCAGTGCCTAATGTTGAGGCACCCAGACTGACACTGGCAGGAGGTGATGGTGTGCATGTTAGTAAAACCATACCACTTTCAAGTCCTTTATCTGTTTCTTCAGCACAATCAGTGAGTGGTTCAAGTAGCAGTGATGAATTTCTGGCAGCTAAAACATCTGGAGGTACCCCTTTGTCTGTTAACACAGTGGAGACTCCTAAAGTAGTCAACACAACCACCATGCTGCCATCAGCTGTGCCACAAGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTATTGAGTGGAGCACCATATAACCTCAACCTCAACAAGAAGTTTGAGAATATGGCAGAGCATAGTGCAACTCTTTCAAACACCAGGGCAAGTGAGGGTGGTGATGCACTATCAACCAAGCAAGGATAA 1032 0.438 MERDFLGLNSKEPLVVVKEKMNNDSGCKDTGFTKGMVKWPFMNKVSVHPHLMFLNTPQKSLNHDGQGGIHFSLAPALHDVIYMNRPHDVKMLSVPKQTIPVSMGHPTLKNHFTTVGQNMNASGMKQPLLRAMPITAPHSVLPIVGADAAPGMTKTCNCVKPSASVPKLTIFYAGTVNVFDDISPEKAQAIMLMARNDLSAASNVAVPNVEAPRLTLAGGDGVHVSKTIPLSSPLSVSSAQSVSGSSSSDEFLAAKTSGGTPLSVNTVETPKVVNTTTMLPSAVPQARKASLARFLEKRKERVLSGAPYNLNLNKKFENMAEHSATLSNTRASEGGDALSTKQG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00261 343 Pfam tify domain 167 194 IPR010399 -
Phac3g00261 343 SMART tify_2 161 196 IPR010399 -
Phac3g00261 343 MobiDBLite consensus disorder prediction 323 343 - -
Phac3g00261 343 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 122 318 IPR040390 -
Phac3g00261 343 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
Phac3g00261 343 Pfam Jas motif 284 308 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00261 Phac-Chr3 1793469 1797535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00261 37 311 Tify Gene Family AT3G17860 36.304 3.93e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g00261 tify 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00261 K13464 - gmx:100799314 378.252