Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00244 ATGTCAGTCTCCAACGTACTGAGGTCATCAAAACTGGTGTCATGGAATCCCACGGGGAGGCTTCAGCAAACCCTAGCCGGATGCGTGGAGAGGAACGGCGCGGGTCTGCATTCCGGGAAGGTTTCGACGGTGAGGCTGCGGCCCGAGCTCGCTTCCCGAGGCAGGTACTTCGATTTTCGTTCCCGTTCGATTCCCGCCGCCGTCGAGTACGCTCAGGTCTCGCCGCTCTGCACAGCTCTGAGCAAGGACGGGATCCGAATTCGAACCGTGGAGCATTTGCTTTCGGCTTTGGAGGCTTCGGGTGTTGATAACTGCAGGATTGAGATTGAGGGTTTTGATGATGAAGAGAACGACGCTGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGGTGGGAGCAGTGGAAGAAGTTGGTTTAATGGTGGCCACTGATCTTGATGGCAAAAGTGTTCAGAAAATGGCACCACATGTGAATGAACCAGTGTTTGCTTGGAGAAATGATTCTTTTGTTGCAGCATTTCCTTCTAAAACGGTTCAAATAACTTATGGCATCAACTTTCCGCAGATAGCTTTGTCGAGAACCTTCTGCATTCATGAAGAGATTGAGCCGATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAAAATGCCATTGTGTGCAGTGCCAAGAACGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGTCGTCACAAGATCTTAGACCTTATTGGTGATCTCTCCTTGGTTGCTCGATCTGGAAATCAAGGACTTCCAGTGGCACACATCGTAGCGTACAAGGGTGGCCATGCATTGCATGCTGATTTGGCTCGCCGCCTGTTAGGAATGAGTTGA 867 0.5017 MSVSNVLRSSKLVSWNPTGRLQQTLAGCVERNGAGLHSGKVSTVRLRPELASRGRYFDFRSRSIPAAVEYAQVSPLCTALSKDGIRIRTVEHLLSALEASGVDNCRIEIEGFDDEENDAEIPIFDGSAREWVGAVEEVGLMVATDLDGKSVQKMAPHVNEPVFAWRNDSFVAAFPSKTVQITYGINFPQIALSRTFCIHEEIEPMRNAGLIKGGSLENAIVCSAKNGWLNPPLHFSDEPCRHKILDLIGDLSLVARSGNQGLPVAHIVAYKGGHALHADLARRLLGMS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00244 288 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 285 IPR020568 -
Phac3g00244 288 Gene3D lpxc deacetylase, domain 1 20 145 IPR015870 GO:0008759|GO:0009245
Phac3g00244 288 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 5 190 IPR004463 GO:0008759|GO:0009245
Phac3g00244 288 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 285 IPR004463 GO:0008759|GO:0009245
Phac3g00244 288 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Phac3g00244 288 Gene3D lpxc deacetylase, domain 2 157 288 IPR011334 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00244 Phac-Chr3 1656610 1660667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00244 9 284 Carbohydrate Esterase AT1G25054 63.758 4.62e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00244 K02535 - gmx:100814465 472.626