Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00240 ATGGACGAACACGCCTTCCTTTTGCAGGCACCTGTTATTGGCTGCCAGTGGTTTTCTACTTCCCCCTTGGATAATTTGGTTTATTCCATGCAGATAGCTTTGTCGAGAACCTTCTGCATTCATGAAGAGATTGAGCCGATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAAAATGCCATTGTGTGCAGTGCCAAGAACGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGTCGTCACAAGATCTTAGACCTTATTGGTGATCTCTCCTTGGTTGCTCGATCTGGAAATCAAGGACTTCCAGTGGCACACATCGTAGCGTACAAGGGTGGCCATGCATTGCATGCTGATTTGGCTCGCCGCCTGTTAGGAATGAGTTGA 393 0.4733 MDEHAFLLQAPVIGCQWFSTSPLDNLVYSMQIALSRTFCIHEEIEPMRNAGLIKGGSLENAIVCSAKNGWLNPPLHFSDEPCRHKILDLIGDLSLVARSGNQGLPVAHIVAYKGGHALHADLARRLLGMS* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00240 130 Gene3D lpxc deacetylase, domain 2 3 130 IPR011334 GO:0008759|GO:0009245
Phac3g00240 130 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 127 IPR020568 -
Phac3g00240 130 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 9 128 IPR004463 GO:0008759|GO:0009245
Phac3g00240 130 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 9 127 IPR004463 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00240 Phac-Chr3 1656610 1660667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00240 9 126 Carbohydrate Esterase AT1G25054 72.881 1.46e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00240 K02535 - gmx:100814465 224.557