Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00200 ATGATAACCAGATCGAGAAAATTGAAGCGCAAGCTCGAGCCGGAGCCACTTCCACTCATCGTCACCAAGAAGCTCCGGCAGAAGCTGCCTCGCCGGCCAAGGCAAAACTTCTCGCCGGTGCTTCTCGTCAGAAACTCTGGAATGAATCCTCGTTTCTCTATGGATTCCAGCTCCGGCTCCGACTTCGCTGCAGGTGAAGCTTCTTGCAACTCCAGCAGAGCTTCCATCGCCGGCAAGGGAAACACGAACTCGAGAAATGAATCGTCGATCGATTCGACGAGAAATCAGAGGTTAGAGAAGCGAAACGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGAACGAGGCAGAAGCTCAATTCTGAAGTTCAAAAGCGGAAGAGAATTTAAGAATCTGAGAGGAGAAGACGACGTTTCGAAAGTGTGCCTGAAATCGGATACTGCTGCTGTTCTGAAGTTCAAAACCGTTAGAGAGAGTAAAAATGTAAAGGAACATGACGACGTTTCGTGCGGGAAATCAGAGATTACTTGCGAGGAACAGTTCAATTCGAAGTCCTCCAGTGACGGAAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAGACGTCGTATCGTTTAGTTCCTTTGTTCGCGCGTCGTTTGAGGAGGAAAAGGATATCAGCAAGGAAAACAGAGCGTCGGAATGTGAATACTCTGAAGGTTCTAAAAACCTCCACGCGGAAGAGAATTGCGCGGATTTAATAGCGCAATCGATGACGAAGCAGGAATCCGAAAATGACGACCTCGCTGTCGACCTCACTTGCTCTGAGGATCTGTGTTTCTCGTATAGTGAAGACGATGACGAATCGGAATATTGTTCCAGTCAGGGAACCGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGAGACTTCGGATTACTCTCCGTCGGTGTTCGCGGATTCTGGAAGCCAGTTTTCCGAGGGATCCTTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAGTTTCTAGTTCTCCAGTGATAAACTCTTCTTCTAGTGACGAAGATGAAGCCAATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAAAGGAAGCAAGGTTTTGTCTCAAATTATGGTGAAAGATATTTCTCTACTACTGAATTCGGAGAGACCGTACTTGAGCAACGTTCGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACTATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTGAGCAAAGGATACTTCAAAGCCGAAAAACACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGATCAGGATCGAAGAAAATCAGCAACACAACAGAGTGGGGCAAATCAGTTTCAACATAGGAAGCAATAAGTACAGTAGAGGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCCAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTGGTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTTGTCCTGGCTGGTCTTGAAGTCAATCAAAGTTCATCGCTCAGAGTAATTGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGAGAGCCTGGAGTGGCTGTTACGCTATATAGGATAA 1848 0.4692 MITRSRKLKRKLEPEPLPLIVTKKLRQKLPRRPRQNFSPVLLVRNSGMNPRFSMDSSSGSDFAAGEASCNSSRASIAGKGNTNSRNESSIDSTRNQRLEKRNENEVEVSESSCADSNSFARERGRSSILKFKSGREFKNLRGEDDVSKVCLKSDTAAVLKFKTVRESKNVKEHDDVSCGKSEITCEEQFNSKSSSDGNGNMKISSESNGDVVSFSSFVRASFEEEKDISKENRASECEYSEGSKNLHAEENCADLIAQSMTKQESENDDLAVDLTCSEDLCFSYSEDDDESEYCSSQGTVFSEFHSEIFGECSQQETSDYSPSVFADSGSQFSEGSFGETPSPTYLLFLQYRKEFTTLVSSSPVINSSSSDEDEANFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRSQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLSKGYFKAEKHLQIVGIACLTLAIRIEENQQHNRVGQISFNIGSNKYSRGEVVAMEWMVQEVLQFQCFLPTIYNFLWFYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEVNQSSSLRVIGIHVRSKDENLYECIESLEWLLRYIG* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00200 615 MobiDBLite consensus disorder prediction 72 117 - -
Phac3g00200 615 SUPERFAMILY Cyclin-like 382 520 IPR036915 -
Phac3g00200 615 PIRSF Cyclin_A_B_D_E 257 612 IPR046965 GO:0016538|GO:0044772
Phac3g00200 615 PIRSF Cyclin_A_B_D_E 54 287 IPR046965 GO:0016538|GO:0044772
Phac3g00200 615 SUPERFAMILY Cyclin-like 524 611 IPR036915 -
Phac3g00200 615 PANTHER CYCLINS 369 606 IPR039361 -
Phac3g00200 615 Pfam Cyclin, N-terminal domain 417 520 IPR006671 -
Phac3g00200 615 ProSitePatterns Cyclins signature. 423 454 IPR006671 -
Phac3g00200 615 SMART cyclin_7 428 515 IPR013763 -
Phac3g00200 615 Pfam Cyclin, C-terminal domain 524 608 IPR004367 -
Phac3g00200 615 MobiDBLite consensus disorder prediction 92 108 - -
Phac3g00200 615 Gene3D - 414 517 - -
Phac3g00200 615 CDD CYCLIN_SDS-like_rpt2 524 611 - -
Phac3g00200 615 MobiDBLite consensus disorder prediction 72 91 - -
Phac3g00200 615 Gene3D - 518 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00200 Phac-Chr3 1436506 1441659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00200 423 584 Core Cell Cycle Gene Families AT5G25380 37.725 1.35e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00200 K21777 - gmx:100817658 868.611