Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00197 ATGGGTTTTGTTTCTTGGGTTGTTGGGTTGTTGTTTTTTGTGGGGTTTGAGTGTGCGTGGTGTCAAGATGATGTTGTGATGAACATATTGAAGAAGGCCGTCAAAGAATCGGATGGTCTTCAATGGAATGACCCGGATGTGTGTAAATGGAAGCACGTTCAGTGCAGCGCCATGAAGAGGGTCACTGCAATTCAAATTGGGGGACAGAGTTTGCAGGGTTCTCTGCCTAAGGAACTGGGGCAGCTCTCGGAGTTGACACGGTTTGAGTGCATGAGCAATAACTTCACTGGGCCATTTCCTAACATGCCAAAGTCTCTTGAGGTTCTGCTCATCCACAACAACAATTTCCAATCCTTTCCGGGTGATTTCTTCACCGGCATGACCAATTTGCAGTCTGTGAGCATTGGCTACAACCCTTTTTCACAGTGGGGGATTCCTGATAGCCTCAAGGAATGTGTGGCTCTCAGGAGTTTCTCTGCAATCAATGCTGGCTTTGTGGGGAAAATCCCTGATTTTTTTGGTAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTGCCTTGAGTTTTAATTCTCTTGAAGGAGGGTTGCCTGCAACCCTTTCTGGGAGTTCTGTGGAGACACTTTGGTTGAATGGTCAGAAAAGTGGTAGTAAACTCAATGGTACCCTTGATGTGCTAAAGAGCATGACATATTTGAAACAAATTTGGGTGCATGGTAACTCGTTCACAGGTCCTATACCGGACTTGTCAAAACATGATCAACTATATGATGTGAGCTTTAGGGATAACCAGTTAACTGGGGTTGTTCCACCCTCCCTCACTGCTCTTCCTGCACTTAAAGTAGTGAATTTGACCAATAACTTACTTCAAGGCTCTCCTCCCTTGTTCAGAAATGGAGTGCAGGTTGATAATGATTTAGAGAAGGGGATCAATAGTTTTTGCACAGCGGAGGCTGGTAAGCCATGCAGTCCTCTTGTGGATGCTTTACTTTCTGTTGTTGAACCTTTTGGATATCCTCTAAGACTTGCTGAAAGTTGGAAGGGGAATGACCCTTGTGGTCAAAGATGGTTGGGGATTGTTTGTGCAAATGGTAACGTTTCCGTCATTAACTTGCAGAACATGAATCTCTCTGGTAACATTTCTCCCAGTTTTGCTTTGCTTACATCTGTGACAAAGTTGCTTCTTGGAGGCAATGGCCTCACTGGTACCATACCAAGTGAACTCACCAGCATGCCTCTTTTGGTAGAATTGGATGTCTCCAACAATCAATTGCTCGGAAAGGTGCCGTCTTTTCGTGGTGGTGTAGTTGTGAAAACTGATGGGAATCCTGATATTGGAAAGGATAGACCTCAAGCTCCACCTGACTCAAGTTCTCGAGGTAAATCTGGAGGTGGTCAAGTTACGAAACATAACACTGGAGCAATTGTTGGGACTGTGTTGGGAGGTGTCAGTTTACTTGGTTTAGGGGCTTTCATATTTCTTATGTATAGTAGAAAACGTAAGCGTGCAGGCAAAGTTCAAAGTCCTAGTGCAATAGTGGTACATCCTCGTTATTCTGGAGATGGAAATGGTCTGAAGATAAGTGTTGCAGATGCTGGTGTTAGTGGTGGTGGTGGTGGTGGAGGAGGAATTAGTGCACTTAGTCCAGCTAGTAGTATTCAACATGTGGAGGCTGGTAGTATGGTGATTTCAATCCAAGTTTTGAGACAAGTTACAAACAATTTCAGTCAGGCAAACATATTGGGGAGAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATCTGGAATGATGGGTGAGAAGGGGCTGGGTGAGTTTGAGTCTGAAATTGCAGTACTTACTAAGGTTCGACACAGACATCTGGTTGCACTAGAAGGCCACTGCTTGGATGGACATGAGAAGCTTCTTGTGTATGAATATATGCCTCAGGGTCCTCTCAGTAAACATTTATTTGACTGGAAAGAAGAAGGGATACAACCACTGGATTGGAAGAGAAGGCTCTCCATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCACGGTTTGGCCCAACAAATTTTTATCCATAGGGATCTAAAACCATCAAACATCTTGCTTGGGGATGATATGCGGGCCAAAGTCTCAGACTTTGGATTGGTTCGGCTTGCCCCAGAAGGACAGACCTCATTTGAAACTAGGCTTGCTGGTACTTTTGGATATCTGGCTCCAGAGTATGCAGTGACTGGACGAGTTACAACAAAGGTTGATGTTTACAGCTATGGAGTGATTCTGATGGAGATGCTAACAGGAAGGAGAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTTGTTACATGGTTCAGGAGGATGCTACTGAACAAAGACTCTTTTGGCAAGATTGTTGACCCCATAATGTGTGTTGATGAGGAGGCCTTACCCAGTTGTAGGACTGTGGCTGAGTTGGCTGGTCACTGTTGTGCAAGAGAACCTCACCAGCGTCCAGACATGAGCCATGTGGTGAATGTCCTAGCCCCTCTTGTGGAGATTTGGAAGCCTTCTGAGACAGATGATGAAGATGTTTATGGCATTGACTTGGACATGACATTGCCACAAGCACTCAGTAAGTGGCAGGCTCTTGGAGGAAGGAACACCTTTGATGGATCAACCTCTTCATCAATGCTTACCAGTGGAGAAAATACACAGTCTAGCATACCAACTAGGCCTTTTGGATTTGCTAATTCTTTTAATTCCTCTGATGGAAGATGA 2790 0.4473 MGFVSWVVGLLFFVGFECAWCQDDVVMNILKKAVKESDGLQWNDPDVCKWKHVQCSAMKRVTAIQIGGQSLQGSLPKELGQLSELTRFECMSNNFTGPFPNMPKSLEVLLIHNNNFQSFPGDFFTGMTNLQSVSIGYNPFSQWGIPDSLKECVALRSFSAINAGFVGKIPDFFGKDGPFPGLVSLALSFNSLEGGLPATLSGSSVETLWLNGQKSGSKLNGTLDVLKSMTYLKQIWVHGNSFTGPIPDLSKHDQLYDVSFRDNQLTGVVPPSLTALPALKVVNLTNNLLQGSPPLFRNGVQVDNDLEKGINSFCTAEAGKPCSPLVDALLSVVEPFGYPLRLAESWKGNDPCGQRWLGIVCANGNVSVINLQNMNLSGNISPSFALLTSVTKLLLGGNGLTGTIPSELTSMPLLVELDVSNNQLLGKVPSFRGGVVVKTDGNPDIGKDRPQAPPDSSSRGKSGGGQVTKHNTGAIVGTVLGGVSLLGLGAFIFLMYSRKRKRAGKVQSPSAIVVHPRYSGDGNGLKISVADAGVSGGGGGGGGISALSPASSIQHVEAGSMVISIQVLRQVTNNFSQANILGRGGFGTVYKGELYDGTKIAVKRMESGMMGEKGLGEFESEIAVLTKVRHRHLVALEGHCLDGHEKLLVYEYMPQGPLSKHLFDWKEEGIQPLDWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMLTGRRAIDNSQPEENVHLVTWFRRMLLNKDSFGKIVDPIMCVDEEALPSCRTVAELAGHCCAREPHQRPDMSHVVNVLAPLVEIWKPSETDDEDVYGIDLDMTLPQALSKWQALGGRNTFDGSTSSSMLTSGENTQSSIPTRPFGFANSFNSSDGR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00197 929 MobiDBLite consensus disorder prediction 895 929 - -
Phac3g00197 929 FunFam Receptor-like kinase TMK4 21 319 - -
Phac3g00197 929 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Phac3g00197 929 FunFam receptor protein kinase TMK1 653 870 - -
Phac3g00197 929 FunFam Leucine-rich repeat receptor-like kinase 324 448 - -
Phac3g00197 929 SUPERFAMILY Protein kinase-like (PK-like) 554 851 IPR011009 -
Phac3g00197 929 Pfam Protein kinase domain 576 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00197 929 SUPERFAMILY L domain-like 27 429 - -
Phac3g00197 929 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00197 929 Gene3D Ribonuclease Inhibitor 325 449 IPR032675 -
Phac3g00197 929 MobiDBLite consensus disorder prediction 439 469 - -
Phac3g00197 929 CDD STKc_IRAK 581 854 - -
Phac3g00197 929 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Phac3g00197 929 Gene3D Transferase(Phosphotransferase) domain 1 653 871 - -
Phac3g00197 929 Pfam Leucine rich repeat N-terminal domain 41 56 IPR013210 -
Phac3g00197 929 Pfam Leucine rich repeat N-terminal domain 327 361 IPR013210 -
Phac3g00197 929 SMART serkin_6 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00197 929 Gene3D Phosphorylase Kinase; domain 1 545 652 - -
Phac3g00197 929 PANTHER OSJNBA0070M12.3 PROTEIN 19 929 - -
Phac3g00197 929 MobiDBLite consensus disorder prediction 455 469 - -
Phac3g00197 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Phac3g00197 929 FunFam receptor protein kinase TMK1 543 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00197 Phac-Chr3 1415638 1420446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00197 61 857 Receptor kinase-like Gene Family AT5G07280 30.667 1.62e-74 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Phac3g00197 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00197 K00924 - gmx:100776064 1521.91