Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00196 ATGGTTTTTGGTTGGTGCTGCTCTGTGTGTCTCTTATTTGTCTTGGTGGGTTTGAGAGTAGAGAAAGCTAATGCTCAGTTTTATAGAAAAATTGGAACAAAACACTTACCTTACTGGTCAATAGTGGTGGACCAATCAGGGCATGGAAACTTCACTGCAATACAATCTGCCATTGATTCAGTCCCTTCTCACAACATGTATTGGGTTTCCATCAAGGTCAAGGCTGGTACCTATAGAGAAAAAGTGAAGATTCCTTATGATAAGCCTTACATCATATTAAAAGGGGAGGGAAAGAGAAGAACTTTTGTTGAGTGGGATGACCATGATAATACCTCACAGAGTCCTACGTTTGCTGCCATGGCTGACAATATTGTTGTCAAATCCATGAGCTTTAGGAGGTGTTCCATATCTGTGATTGGAGGGGCACTAGATCCTGGGTCACCAGGTTTCATCACAGCACAAGGGAGAACAAATTCAGAAGATGGAAATGGGTTTGTTTTCAAAGACTGCCATGTGTTTGGAAATGGTTCAACTTACTTGGGGAGGCCTTGGAGAAATCATGCTAGGGTTTTGTTTTACAAGACCAACATCTCCAACATTGTTCAACCCTCTGGTTGGACTGCAGGAAAATTTGATCCATATGAGGGTGGCATAACATTTGCAGAGTATGGGAATTTTGGGCCAGGTTCTGACACTTCTGAAAGAGTGAGTTGGAGCAAGAAGTTGGATTTAGAAACAATTGAGAATATGACAAGCACCAAGGAGAAGGTGATGATCCCTGAAGACAAGCCTTATATAGTCCTAAAAGGAGTGGGAAAAAGGTGTGTTATTGTTGAGTGGGATGACCATGATTCAAGTGCACAGAGTCCTACATTCTTAACCATGGCTGAAAATATTGTGGTCAAGGCCATCACCTTCAGGAATACTTTCAATGATCCAAATAAAGGGAACCCCATGAGACCTGCATTAGCTGGAATGATAGCTGGAGACAAGACATCCTTCTATCAAGTTGGCTTCTATGGTTTGCAAGACACTTTGTGGGATGTTAAAGGAAGACATTACTTCAATTGTTGCACCATTGAAGGTGCTATGGATTTCATCTATGGTGCTGGTCAATCTTTACATGAGAGCTGGAGTAACATTTGCAGAGAGTGA 1155 0.4182 MVFGWCCSVCLLFVLVGLRVEKANAQFYRKIGTKHLPYWSIVVDQSGHGNFTAIQSAIDSVPSHNMYWVSIKVKAGTYREKVKIPYDKPYIILKGEGKRRTFVEWDDHDNTSQSPTFAAMADNIVVKSMSFRRCSISVIGGALDPGSPGFITAQGRTNSEDGNGFVFKDCHVFGNGSTYLGRPWRNHARVLFYKTNISNIVQPSGWTAGKFDPYEGGITFAEYGNFGPGSDTSERVSWSKKLDLETIENMTSTKEKVMIPEDKPYIVLKGVGKRCVIVEWDDHDSSAQSPTFLTMAENIVVKAITFRNTFNDPNKGNPMRPALAGMIAGDKTSFYQVGFYGLQDTLWDVKGRHYFNCCTIEGAMDFIYGAGQSLHESWSNICRE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00196 384 Gene3D - 254 383 IPR012334 -
Phac3g00196 384 Gene3D - 131 253 IPR012334 -
Phac3g00196 384 Pfam Pectinesterase 41 132 IPR000070 GO:0030599|GO:0042545
Phac3g00196 384 Pfam Pectinesterase 145 240 IPR000070 GO:0030599|GO:0042545
Phac3g00196 384 Pfam Pectinesterase 254 374 IPR000070 GO:0030599|GO:0042545
Phac3g00196 384 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 254 377 - -
Phac3g00196 384 SUPERFAMILY Pectin lyase-like 40 249 IPR011050 -
Phac3g00196 384 Gene3D - 21 130 IPR012334 -
Phac3g00196 384 SUPERFAMILY Pectin lyase-like 254 377 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00196 Phac-Chr3 1399899 1411055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00196 255 376 Carbohydrate Esterase AT2G19150 42.623 3.65e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00196 - - gmx:100818719 300.056