Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00185 ATGATGAAACCAAACTTGAACCTGGAACCTGAAGATGATTCAAAAATGTACAGCCAAGAAGGATCAGACGAATCACATGATTTTACTATGGACAACACAAGTTCCTCCTGTCTGACAAAGGCTGATCCTGATTCAGGTTCTCTGTCCCTTGACTTGACCCTCAACTTCAATCTCAGTGATGAAGAGTTGAAAGGTGCAACAAGTCACACTAACTCTGAAGCAGGAGGTGAAACTCATGGCTCAGCAATAGCAGTTCCCAGAGTTTTCTCTTGTAACTATTGCAGGAGGAAATTCTTCAGCTCACAGGCATTAGGGGGCCATCAGAATGCTCACAAAAGGGAGAGGACAATGGCAAAACGTGCAATGAGAATGGGGATGCTCACTGAAAGGTACACAAGCTTAGCATCTCTGCCTCTCCATGGTTCTGCTTTTCGGTCACTTGGCCTTGAAGCTCATGCTGCAATGCACCAAGCACATTTGCATACACTGAGAGCTCCTGATATGATGGCTGCATCAAAATTCAGGAAAGACTATTTTCGGACACCAATCTTTGTTGAAGATGATGATGTTGGTGTGTTTTGGCCTGGCAGTTTCAGACAGATAGATGGAAGTACTAGGTTTGTAGCAACTCCTGCTCCAGCACAAACATCTGCATCTCCTGATCTCACTCTGAGGCTTTGA 681 0.4479 MMKPNLNLEPEDDSKMYSQEGSDESHDFTMDNTSSSCLTKADPDSGSLSLDLTLNFNLSDEELKGATSHTNSEAGGETHGSAIAVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMLTERYTSLASLPLHGSAFRSLGLEAHAAMHQAHLHTLRAPDMMAASKFRKDYFRTPIFVEDDDVGVFWPGSFRQIDGSTRFVATPAPAQTSASPDLTLRL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00185 226 MobiDBLite consensus disorder prediction 1 42 - -
Phac3g00185 226 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Phac3g00185 226 SUPERFAMILY beta-beta-alpha zinc fingers 87 117 IPR036236 -
Phac3g00185 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Phac3g00185 226 MobiDBLite consensus disorder prediction 1 27 - -
Phac3g00185 226 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 23 162 IPR044246 GO:0009788
Phac3g00185 226 FunFam Zinc finger protein 2 66 135 - -
Phac3g00185 226 MobiDBLite consensus disorder prediction 28 42 - -
Phac3g00185 226 Gene3D Classic Zinc Finger 78 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00185 Phac-Chr3 1352642 1356159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00185 43 226 C2H2 Transcription Factor Family AT1G24625 42.105 8.63e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g00185 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00185 - - gmx:100777133 337.035