Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00147 ATGGGTTGTGTTTGTTTTCTCTTCAAGTTTCAATGGGCTAATGTTAGCACTGTTCTTGTTTCTATGGTTGCAGCAATTTCAGCTCTGAAGGTGGAGTTAGCGAAATGCAGAACTTTCAAGTCTGAGCCTGTTTTGGAGGAGTTCATTCCTCTGAAGAAGGAGGATAGTGAGAAGGAAGAGAAATGCAGGGAGAAGAATGATTGGGTGAGTTCTTTCCAGCTTTGGAACACTGATGACGATGAAGCTTGTAACAGGAGCAATGCATGTAGATTGGAGCAGAAACAAAAGAAGATAAAGGGAGAAGAAAGAGAATCTGTAGAGAGGGGATTTGTTATGCCTTTGTCCACTTACCTTGCAACAGATGAAGAATGTGTTGTCAGTGGACTTTCTCTTCAGACACCTGCAAGGGAGGGATGTGGTTCCAAAACCAGCTCTTGCAGGGTGGTTTCCTCCGCCACTTCGCCCCTGATGCTGCCTCAGAGTGGCCGGAAACAGAGGAGGTGCTGGTCGCCGGAGTTGCATCACCGTTTTGTCAAGGCATTAGAGGAGCTTGGAGGCTCTCAAGGTAGAAGATTTAAAACTAACATACCATCAATCTTATCTGGGCACCTAACTAGTACAACTATTTTGCTTCTTAGAATGGCACTTAGCATTTTGATTGATGGAAACTCAGCTACTCCAAAGCAAATTAGGGAACTCATGAGGGTTGATGGCCTGACCAACGATGAAGTAAAGAGTCATTTACAAAAATACAGACTTCATACAAGGAGAGTTCCAGCTGCTACAGCTGCAACTTCTGATAGGTGTGGTGTAGATCTTGGAGGCTTGTGGATGCAGAAAGAATCCTTGAAGGGGAGAAGTTCTGGTTCTCCTCAAGGTCCTCTCCAATTGGCTACACAATCTGGGGAAGCCACATCCACAACAGAAGGTGACAACATGGTAGATGATGATATAAAATTAGAGGAGTTTCACAACTACTCAAGAACAACACATGATACATAA 1002 0.4411 MGCVCFLFKFQWANVSTVLVSMVAAISALKVELAKCRTFKSEPVLEEFIPLKKEDSEKEEKCREKNDWVSSFQLWNTDDDEACNRSNACRLEQKQKKIKGEERESVERGFVMPLSTYLATDEECVVSGLSLQTPAREGCGSKTSSCRVVSSATSPLMLPQSGRKQRRCWSPELHHRFVKALEELGGSQGRRFKTNIPSILSGHLTSTTILLLRMALSILIDGNSATPKQIRELMRVDGLTNDEVKSHLQKYRLHTRRVPAATAATSDRCGVDLGGLWMQKESLKGRSSGSPQGPLQLATQSGEATSTTEGDNMVDDDIKLEEFHNYSRTTHDT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00147 333 Gene3D - 163 256 - -
Phac3g00147 333 MobiDBLite consensus disorder prediction 283 333 - -
Phac3g00147 333 MobiDBLite consensus disorder prediction 283 311 - -
Phac3g00147 333 SUPERFAMILY Homeodomain-like 220 257 IPR009057 -
Phac3g00147 333 MobiDBLite consensus disorder prediction 312 333 - -
Phac3g00147 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 220 254 IPR006447 GO:0003677
Phac3g00147 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 24 311 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00147 Phac-Chr3 1106907 1110290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00147 43 281 G2-like Transcription Factor Family AT2G03500 34.201 6.14e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g00147 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00147 - - pvu:PHAVU_003G012400g 458.373