Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00139 ATGGCTCACCATTGCTCAAACAAGGCCCTTGGTCTTCTCATTTTTCTGTCTCTTCTTTCAACCATTTGTTCTGCTCAATTTGTTTCTGAATTCACCCATTCTGAACCAGTTGATCCAGCTGATGCAGCAGCACCAGCACCTGAAGTTGAAGATGGAGCAGAACTAGCCCCAGCACCATCTATAGAATTTGAAAACGATGAACCCCTAACTCCACCACCACCTGCAAAAACAAATGAAAGACTCAAAAAAGCTCATATTGCTTTCAAGGCATGGAAGAAGGCTATTCACTCCGACCCTTTGAACATAACCGGCAATTGGGTTGGTGAAGATGTTTGCTCCTACAATGGTGTGTATTGTGCTCCTGCCCTTCATGATCCCACCATCAATGTGGTTGCTGGCATTGATCTTAACAATGCAGACATTGCTGGGAACCTCCCTGAAGAGTTGGCACACTTGGAAGATATTGCACTTTTCCACATCAACTCCAATAGATTCTGTGGTGTGATCCCACAGAACTTGCAGAATCTCACACTCATGCATGAGTATGATATCAGCAACAATCGCTTTGTTGGTAGCTTTCCCTCTGTGGTTCTCACATGGCCGAATTTGAAGTACTTGGACCTCAGATTCAACGACTTTGAAGGAGCCATTCCCCCAGAGCTTTTTCACAAGGATCTTGATGCAATCTTCTTGAACAACAACCGTTTCACATCCATCATCCCAGACTCTCTGGGAAACTCCAGCGCCTCTGTGATCACCTTTGCCTACAACAACTTCAAAGGGTGCATTCCAAATTCCATGGGAAACATGAGGAACTTGAATGAGATTGTGTTCATAGGGAACAACCTTGGAGGGTGCTTCCCACAGGAGATTGGAACGATGGAAAATTTGAGGGTTTTGGATTTGAGCGACAATGGGTTTGTGGGGACTCTTCCTAACTTGTCAGGGTTGAAGAGTGTTGAGGTGATTGACATTGCACACAACAAGATGAGTGGATATGTGTCTAACTCTGTTTGCCAGCTTCCTGCGTTGAAGAACTTCACGTTTTCTTACAACTACTTCAATGGGGAAGCTCAGAGCTGCGTGGCGGAGTCGAATCCTTCGGTGGCTTTGGATGACTCGTGGAATTGTTTGGCGGGAAGGAAGAATCAGAAGTCGTCGATGAAGTGCTTGCCGCCATTCGCCAAAGCCATCTCCTTCTCCTAA 1206 0.4577 MAHHCSNKALGLLIFLSLLSTICSAQFVSEFTHSEPVDPADAAAPAPEVEDGAELAPAPSIEFENDEPLTPPPPAKTNERLKKAHIAFKAWKKAIHSDPLNITGNWVGEDVCSYNGVYCAPALHDPTINVVAGIDLNNADIAGNLPEELAHLEDIALFHINSNRFCGVIPQNLQNLTLMHEYDISNNRFVGSFPSVVLTWPNLKYLDLRFNDFEGAIPPELFHKDLDAIFLNNNRFTSIIPDSLGNSSASVITFAYNNFKGCIPNSMGNMRNLNEIVFIGNNLGGCFPQEIGTMENLRVLDLSDNGFVGTLPNLSGLKSVEVIDIAHNKMSGYVSNSVCQLPALKNFTFSYNYFNGEAQSCVAESNPSVALDDSWNCLAGRKNQKSSMKCLPPFAKAISFS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00139 401 SUPERFAMILY L domain-like 93 360 - -
Phac3g00139 401 ProSiteProfiles Leucine-rich repeat profile. 296 318 IPR001611 GO:0005515
Phac3g00139 401 Gene3D Ribonuclease Inhibitor 83 381 IPR032675 -
Phac3g00139 401 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 18 395 - -
Phac3g00139 401 Pfam Leucine Rich repeat 201 215 IPR001611 GO:0005515
Phac3g00139 401 FunFam Leucine-rich repeat extensin-like protein 1 85 246 - -
Phac3g00139 401 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 247 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00139 Phac-Chr3 1037681 1038948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00139 78 401 Trihelix Transcription Factor Family AT3G19020 64.000 4.27e-157 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00139 - - aprc:113870095 557.37