Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00098 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGACAGTATATAAGGTCAAAAGTCCCTCGTTTAAGATGGACCCCTGAACTGCATCGTTGCTTTGTTTATGCCATTGAAACTCTCGGAGGTCATCAGAAGGCTACTCCTAAGCTTGTTCTTCAATTGATGGATGTTAAAGGGCTCACAATTTCCCATGTAAAGAGCCATCTGCAGATGTACAGAAGCATGAAAGGTGATTCCTGCAGACAAGTGACAGACAAGACTTCCACCCAACATAGAAAACAATCTTTTCAGGAGCATGATGATGAAGAGGGTGATGTTGGTTTTCACTCTTGCTTAAAATCCATTGGAAAAGAATCTGATTCCCAGTCCAGTTGCAGTAATTTCTCCCTAAAAAGAGCTAGAATCGAGAAGACAAGTTTATTCTCAGGATTCCCACATTGCAGCCAAAGAATATGTGAAGCAGTCCCAAATCCATACACTACTTTTTATGATTACCTGCAGAGCATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGCTGGTTCAATATTGCAGACTCAACCCCTTTCCACAACCTTTCTTCCCATGCTACCAAGCCAAGAATCAGATTTGCTCCAGGTTCCACACTTAAATGATAAACAGCCTTTGAATGAAGCTGAGAACAGTTGTAGGGTACAATCAGAGGATGAAAACATGGGAGGTTGTGAGTTGTCACTGTCCATCTCATTGCCACAACCATATCCTTCTTCTCAGAAAAGTAATGCTTCTTCAGTCAGCAGCATCAGTGAGGCCTTTTCATTATGCCCTAAGTTTAACACCAACAACAACAACAACTACATGGGCTGTTCTAGTTCTTCTAATGTTCCAAACACAGTTAATGTGGACCTATCTTTGGCCATTTGA 897 0.4181 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGDSCRQVTDKTSTQHRKQSFQEHDDEEGDVGFHSCLKSIGKESDSQSSCSNFSLKRARIEKTSLFSGFPHCSQRICEAVPNPYTTFYDYLQSMAEQKGIKKICAGSILQTQPLSTTFLPMLPSQESDLLQVPHLNDKQPLNEAENSCRVQSEDENMGGCELSLSISLPQPYPSSQKSNASSVSSISEAFSLCPKFNTNNNNNYMGCSSSSNVPNTVNVDLSLAI* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00098 298 MobiDBLite consensus disorder prediction 78 102 - -
Phac3g00098 298 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Phac3g00098 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 96 IPR046955 GO:0003700
Phac3g00098 298 MobiDBLite consensus disorder prediction 83 102 - -
Phac3g00098 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Phac3g00098 298 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Phac3g00098 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Phac3g00098 298 FunFam Myb family transcription factor 17 75 - -
Phac3g00098 298 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00098 Phac-Chr3 811902 817158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00098 1 74 G2-like Transcription Factor Family AT1G14600 70.886 1.60e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g00098 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00098 - - var:108335596 485.723