Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00089 ATGAACTCTCTATTCTCGCCAGAAAACCTTCCTCCACCGCCGGGAATCCCAATCCCCGCCTCTATCGCCGCCGCCACAGCCACCACCAGCGCCTCCCCAGCCCCAACATTAATCCCAAAGCTCGAACCTTTCGACGGATGGTTCAACACCCACACTTCCCAACAACAACAACAATCCCAGGACCCCAATTTTTCAAATGGGTCCCTCGACCTCGACCTCAATCTCTTGTGCGACGGAACCTCCGATGACCCAAACTTGTTCTCCGAGTTCAACAAAATCTCCCAGCTTTTCTGCACGGCGTTCTCCGCCAACGACCCCCAGAACGATGCCGTTCCCGACCCCATCACCGAAGGCCTGCAGCAGCTCCGGAACGACGCCTTTTCCGACCCTTTTGCTGAAAACCCGCAACACTTCCAAAACGGAGTCGTTTCGGGCCCCGGGCTGCAGCAGACCCCAAAGGGCACCTCTCCGGACCCGGATTCGCGGGCAATTGTGCCTGTCCCGGAGGAGGAGCGGTCCTCTTCGATGACGGCCTCAACCACGCCGCGGCGGCGGTGTAAGGAGTTAGTTCGGGTGGCGGATCTAGGCGCGCCGGAGCAGCGGCACTTCCGGGACGTTGTCCGGCGGACCAGGAAGGTGTATGACTCGCTGCGCGTGCTGGCGACTGTGGAGGACGAGCGGCGGGTGGACTCCCGCAGGGGGCGCAGCGATTTGCGAGCCTCCGCCGTGATGAGGAGCTGTGGTTTGTGGTTGAATCGTGACAAGAGAATTGTTGGTTCAATTCCTGGTGTTTGCGTTGGTGATGTGTTCCTCTATAGGATGGAGTTGTGCGTGGTTGGGTTACATGGTCATCCTCAGGCTGGCATCGATTATCTTCCCGGCAGCATGAGTTCGAACGGTGAACCAATTGCCACGAGTGTGATTGTCTCTGGTGGGTACGAGGATGATGTTGACGAGGGTGATGTCATCACTTACTCTGGGCATGGTGGCCAGGACAAGCATTCTAGGCAGGTTTGTCACCAGAAGCTTGAGGGAGGGAACCTTGCAATGGAGCGGAGTAAGCACTATGGGATTGAGGTGAGGGTGATTCGCGGTGTGCGCTATGAGGGTGCAGCCTCTGCCACCGGGAAGTTGTATGTCTATGATGGCCTTTATACGATTATTGATTGCTGGTTTGATGTTGGGAAGTCGGGTTTCGGAGTTTTTAAGTATAAGCTGTGTCGGATCGATGGGCAAGCTAAGATGGGGAGTATGATCATGAAGGAGGCACATATGCTTAAGAAGGATCCTTTGAGTTTCAAACCCATGTGTTGTGTTTCGCTTGATATTTCAAACAGGGTCGAGAATGTTGGGGTTCGCCTTTTCAATGATCTCGATCGCAATTTCGACCCTCTCAGATATGAGTATCTTGTGAAGACAAACTTTCCTCAGATGGTGTTTCACCAGAGTGGGAGGGGTACGGGTTGTGATTGTGTAGACGGGTGTGTTGAAGGGTGCTTTTGTGCCATGAAGAATGGAGGGGAGTTTCCCTATAATCAGAGTGGGGTGCTCTTGAGAGGGAAACCTTTGGTTTTTGAGTGTGGCCCCTTTTGTCATTGCCCTCCTCATTGTAGGAATCGGGTCACACAGAAGGGGATCAAAAATAGGTTGGAGGTGTTTAGATCTAGGGAAACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCCGGTGGTTTTATATGTGAGTACACGGGGGTTGTGCTCACTAGGGACCAAGCAGAAATTTTGTCCATGAATGGTGATTCCTTGATATATCCGAATCGGTTCACTGCTAGGTGGGCGGAATGGGGTGACTTATCTATGATTGACTCCAATTATGTGCGTCCATCTTATCCTTCAATCCCTCCTTTGGATTTTGCTTTGGATGTGTCAAGAATGAGGAATGTTGCCTGCTATGTGAGTCATAGTACCACTCCCAATGTGTTGGTTCAGTTTGTCCTGTATGATCACAATAATTTGATGTTCCCTCACCTTATGCTGTTTGCAATGGAGAACATCCCTCCCATGAGAGAGCTCAGCCTTGATTATGGGGTACCTGACGAGTGGACAGGAAAACTCTCTATAAGTAACTGA 2115 0.5206 MNSLFSPENLPPPPGIPIPASIAAATATTSASPAPTLIPKLEPFDGWFNTHTSQQQQQSQDPNFSNGSLDLDLNLLCDGTSDDPNLFSEFNKISQLFCTAFSANDPQNDAVPDPITEGLQQLRNDAFSDPFAENPQHFQNGVVSGPGLQQTPKGTSPDPDSRAIVPVPEEERSSSMTASTTPRRRCKELVRVADLGAPEQRHFRDVVRRTRKVYDSLRVLATVEDERRVDSRRGRSDLRASAVMRSCGLWLNRDKRIVGSIPGVCVGDVFLYRMELCVVGLHGHPQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDVDEGDVITYSGHGGQDKHSRQVCHQKLEGGNLAMERSKHYGIEVRVIRGVRYEGAASATGKLYVYDGLYTIIDCWFDVGKSGFGVFKYKLCRIDGQAKMGSMIMKEAHMLKKDPLSFKPMCCVSLDISNRVENVGVRLFNDLDRNFDPLRYEYLVKTNFPQMVFHQSGRGTGCDCVDGCVEGCFCAMKNGGEFPYNQSGVLLRGKPLVFECGPFCHCPPHCRNRVTQKGIKNRLEVFRSRETGWGVRSLDLIQAGGFICEYTGVVLTRDQAEILSMNGDSLIYPNRFTARWAEWGDLSMIDSNYVRPSYPSIPPLDFALDVSRMRNVACYVSHSTTPNVLVQFVLYDHNNLMFPHLMLFAMENIPPMRELSLDYGVPDEWTGKLSISN* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00089 704 Pfam SET domain 559 691 IPR001214 GO:0005515
Phac3g00089 704 Pfam Pre-SET motif 443 540 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac3g00089 704 ProSiteProfiles SET domain profile. 548 691 IPR001214 GO:0005515
Phac3g00089 704 MobiDBLite consensus disorder prediction 1 66 - -
Phac3g00089 704 SUPERFAMILY SET domain 431 692 IPR046341 -
Phac3g00089 704 Gene3D - 256 416 IPR036987 -
Phac3g00089 704 SUPERFAMILY PUA domain-like 240 422 IPR015947 -
Phac3g00089 704 ProSiteProfiles Pre-SET domain profile. 487 545 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac3g00089 704 SMART G9a_1 254 412 IPR003105 -
Phac3g00089 704 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 703 IPR025794 GO:0016571
Phac3g00089 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 169 692 - -
Phac3g00089 704 MobiDBLite consensus disorder prediction 132 183 - -
Phac3g00089 704 ProSiteProfiles YDG domain profile. 259 408 IPR003105 -
Phac3g00089 704 Pfam SAD/SRA domain 258 412 IPR003105 -
Phac3g00089 704 MobiDBLite consensus disorder prediction 47 66 - -
Phac3g00089 704 SMART set_7 548 697 IPR001214 GO:0005515
Phac3g00089 704 MobiDBLite consensus disorder prediction 133 157 - -
Phac3g00089 704 Gene3D SET domain 417 704 IPR046341 -
Phac3g00089 704 SMART preset_2 440 532 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00089 Phac-Chr3 720389 728093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00089 204 692 Su(var)3-9 homologs AT5G04940 37.800 7.02e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac3g00089 SAD_SRA 8.3e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00089 K11420 - gmx:100795514 1164.83