Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00079 ATGAGTTCAAGATCCTGGAGGGGTAGCCGTCAGAGGAAGGCGTTGCAGTTGGACCTCAACCTGTTGCCACCATTAGAGGAGACTAGTGTTCAGAATGGTGTTGATCCAAACCAGGATAATGATGATGATGATGTGGTTGAACTGTCACCAACTACATTTGCTCAGGCTAGGAGCAATCAGAGGAGGAGGATTAGGAGGAGCATTTATGATATAGATGATGAGACTGGAGAATTGCCAAAACAGATAGTGATTGATGGAAAAGTCTATAGAACTGTGGAAACTGGTAGCAGTTCTACGGAGGACAATGCAAAGAAGTCACCTGAACCACCTCCTAAGAAACCTGTACTTGATTGTCCAATATGCATGGCTGCTTTTGTAGAACCCATGTCTACCAGGTGTGGTCATATCTTTTGCAAGGGTTGCATTACCACTGCAATATCTACACAGAATAAGTGCCCTACCTGCAGAAAGAAGGTTACAAAGAACCAACTCATAAGGGTCTTTCTTCCATCTCTTACTTAA 522 0.4368 MSSRSWRGSRQRKALQLDLNLLPPLEETSVQNGVDPNQDNDDDDVVELSPTTFAQARSNQRRRIRRSIYDIDDETGELPKQIVIDGKVYRTVETGSSSTEDNAKKSPEPPPKKPVLDCPICMAAFVEPMSTRCGHIFCKGCITTAISTQNKCPTCRKKVTKNQLIRVFLPSLT* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00079 173 ProSitePatterns Zinc finger RING-type signature. 133 142 IPR017907 -
Phac3g00079 173 MobiDBLite consensus disorder prediction 93 112 - -
Phac3g00079 173 Pfam Zinc finger, C3HC4 type (RING finger) 118 155 - -
Phac3g00079 173 SUPERFAMILY RING/U-box 117 162 - -
Phac3g00079 173 MobiDBLite consensus disorder prediction 17 45 - -
Phac3g00079 173 SMART ring_2 118 155 IPR001841 -
Phac3g00079 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 172 IPR013083 -
Phac3g00079 173 ProSiteProfiles Zinc finger RING-type profile. 118 156 IPR001841 -
Phac3g00079 173 PANTHER ELFLESS, ISOFORM B 4 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00079 Phac-Chr3 657207 660761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00079 4 171 C3H Transcription Factor Family AT5G48655 42.132 5.03e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00079 K22651 - gmx:100778432 149.443