Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00075 ATGGGTTCTAACTCCAAAGAGAGTGAAGTTTCCATGGAAGTAGAAAAGGTGGATGATTCATACCTTTCTGCTCTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTGAATGCTGCCATAGACATGAATCTGTTTGATGTGATAGCAAAGGCAAAGAGTTGTAGTGATGATGCAAGTTTTTCTGCCTCTGAAATTGCCTCTTTGCTTCCAAATCAGCACCCACAATTGGCTAATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTCTTCTGCATTGCTCCATTCGCACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCACCAGTTGGAGAATACTTTTCTTATGATCATGATGAACGAATCTCTTTGGCTCCACTCTCAACCTTATTTCATCACGGATTTCATGACCTTTGGAAGGATGCAAAAGGTGCATATTTAGACCCGAATTGCAATGACCATTTTGAAAGTGTTTATGGAATGCCATCATATCAATATATGGAGAAAGATACAGAGTTGAATGAAGTGTTTTTCAAAGCAATGGCTTATGCTGCTCCAGTAGAACTGAAAAGGGTAATCAAAGTATATAAAGGATTTGAGGGATTATCAACACTGGTTGATGTAGGAGGTGGAATAGGACAGGCCCTCAAACTCATTCTCTCTGCATACCCTTCAATTAAAGGAGTTAACTTTGATTTGCCTCAAACAATTCAAGATGCACCTCCTCATCCAGGTATAGAACATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGGGATGCCATTTTAGTAAAGTTCGTATGTCACAATTGGACAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCACCACATGGAAAAGTGATTGTTATGGACTATATAATTCCAGAGGTTCCCAATTCAAGTGATGCATCTAAACATATTAGTATTTTGGACAATCACATGTTTTTAGCACATGGAGGGAGGGAAAGAACTCAGATTGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCTAAGTTTCATGTTGCACGTAATAGCATATCATCTATAGTAGTGATGGAGTTCTATAAGTAG 1110 0.3865 MGSNSKESEVSMEVEKVDDSYLSALLLCFSNVLPAVLNAAIDMNLFDVIAKAKSCSDDASFSASEIASLLPNQHPQLANRLERMLPLLASYSLLHCSIRTNEDGKKERVYALSPVGEYFSYDHDERISLAPLSTLFHHGFHDLWKDAKGAYLDPNCNDHFESVYGMPSYQYMEKDTELNEVFFKAMAYAAPVELKRVIKVYKGFEGLSTLVDVGGGIGQALKLILSAYPSIKGVNFDLPQTIQDAPPHPGIEHVGGDMFESVPSGDAILVKFVCHNWTDEDCIKFLRNCHKALPPHGKVIVMDYIIPEVPNSSDASKHISILDNHMFLAHGGRERTQIEFENLCKSSGFSKFHVARNSISSIVVMEFYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00075 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Phac3g00075 369 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Phac3g00075 369 Gene3D - 2 119 IPR036388 -
Phac3g00075 369 FunFam Caffeic acid 3-O-methyltransferase 3 119 - -
Phac3g00075 369 Pfam O-methyltransferase domain 157 350 IPR001077 GO:0008171
Phac3g00075 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Phac3g00075 369 Gene3D Vaccinia Virus protein VP39 122 369 IPR029063 -
Phac3g00075 369 PANTHER O-METHYLTRANSFERASE 29 358 IPR016461 GO:0008168
Phac3g00075 369 FunFam Uncharacterized protein 121 369 - -
Phac3g00075 369 CDD AdoMet_MTases 209 306 - -
Phac3g00075 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 356 IPR029063 -
Phac3g00075 369 PIRSF O-mtase 2 369 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00075 Phac-Chr3 625381 627852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00075 1 354 Monolignol Biosynthesis Gene Families AT5G54160 44.538 2.79e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00075 - - gmx:106794104 563.533