Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00073 ATGGGTTCTAACTCCAAAGAGAATGAAGTTTCCATGGAAGTAGAAAAGTTGGATGATTCATACCGTTCTGCTGTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAACGCTGCCATAGACATCAATTTGTTTGATGTGATAGCAAAGGCAAAGAGTTCTTGTGATGATTCAAGTTTTTCTGCCTCTCAAATTGCCTCTTTGCTTCCAAATCAGCACCCTCAATTGGCTAATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTCTTCTGCATTGCTCCATTCGCACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCACCTGTTGGAGAATACTTTGCTTATGATCATGAAGGAATCTCCATGGCTCCACTCTCAACCTTACTTCATCGTGGATTTCATCACCTTTGGAAGGATGCAAAAGGTGCATATCTGGACACGAATTGCAGTAACCATTTCGAAAGTGTCTACGGAATGCCATCATATGAATATATGGAGAAAGATACAAAGTTGAATCAAATGTTTTTCAAAGCAATGGCTCATGCTACTCCAATAGAAGTGAAAAGGGTAATCAAAGTATATAAAGGATTTGAGGGGTTGTCAACATTGGTTGATGTAGGAGGTGGAGTAGGACAAACCCTGAAAATCATTCTCTCTGCATACCCTTCAATTAAAGGAGTTAATTTTGATTTGCCTCAGACAATTCAAGATGCACCTCCTCATCCAGGTATAGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGGGATGCCATTTTAGTAAAGCGTATATGTCACAATTGGGCAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCATCACATGGAAAAGTGATTGTTATGGACTATATAATTCTAGAGGTTCCCAATTCAAGTGATGCATCTAAGCATAGTAGTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTCATATTGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCTAAGTTTCATGCTGCATGTAGTAGCATATCATCTATAGGAGTGATGGAGTTCTATAAGTAG 1107 0.3911 MGSNSKENEVSMEVEKLDDSYRSAVLLCFSNVLPAVLNAAIDINLFDVIAKAKSSCDDSSFSASQIASLLPNQHPQLANRLERMLPLLASYSLLHCSIRTNEDGKKERVYALSPVGEYFAYDHEGISMAPLSTLLHRGFHHLWKDAKGAYLDTNCSNHFESVYGMPSYEYMEKDTKLNQMFFKAMAHATPIEVKRVIKVYKGFEGLSTLVDVGGGVGQTLKIILSAYPSIKGVNFDLPQTIQDAPPHPGIEHVGGDMFESVPSGDAILVKRICHNWADEDCIKFLRNCHKALPSHGKVIVMDYIILEVPNSSDASKHSSIVDNHMLLAHGGRERTHIEFENLCKSSGFSKFHAACSSISSIGVMEFYK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00073 368 Pfam O-methyltransferase domain 147 349 IPR001077 GO:0008171
Phac3g00073 368 Gene3D - 2 119 IPR036388 -
Phac3g00073 368 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Phac3g00073 368 FunFam Caffeic acid 3-O-methyltransferase 3 119 - -
Phac3g00073 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 368 IPR016461 GO:0008168
Phac3g00073 368 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Phac3g00073 368 Gene3D Vaccinia Virus protein VP39 122 368 IPR029063 -
Phac3g00073 368 FunFam Uncharacterized protein 120 368 - -
Phac3g00073 368 CDD AdoMet_MTases 208 305 - -
Phac3g00073 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 355 IPR029063 -
Phac3g00073 368 PIRSF O-mtase 1 368 IPR016461 GO:0008168
Phac3g00073 368 PANTHER O-METHYLTRANSFERASE 28 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00073 Phac-Chr3 612477 615270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00073 1 368 Monolignol Biosynthesis Gene Families AT5G54160 43.396 7.49e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00073 - - gmx:106794104 552.747