Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00072 ATGAGTTCTAACTCCAAAGACAGTGAAGTTCCCTTAGAAGTAGAAAAGTTGGATGATTCATACCGTTCTGCTGTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAACGCTGCCATAGACATCAATTTGTTTGATGTGATAGCAAAGGCAAAGAGTTCTTGTGATGATTCAAGTTTTTCTGCCTCTCAAATTGCCTCTTTGCTTCCAAATCAGCACCCTCAATTGGCTAATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTCTTCTGCATTGCTCCATTCGCACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCACCTGTTGGAGAATACTTTGCTTATGATCATGAAGGAATCTCTATGGCTCCACTCTCAACCTTACTTCATCGTGGATTTCATGACCTTTGGAAGGATGCAAAAGGGGCATTTATGGACCCAAATTGCAGTAACCATTTCGAAAGTGTCTATGGAATGCCATCATATCAATATATGGAGAAAGATACAGAGTTGAATGAAATGTTTTTCAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAAGGTACTCAAAGTATACAAAGGATTTGAGGAGTTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGGCAGACCTTGAAACTCATTCTCTCTGCATACCCTTCAATTAAAGGATCTATATGTCACAATTGGGCAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAATGCTTTGCCACCACATGGAAAAGTGATTGTTATGGACTATATAATTCAAGAGGTTCCGAATTCAAGTGATGCATCTAAACATAGTAGTATTGTGGACAATCACATGCTTTTAGCACATGGAGGAAGGGAAAGAACTGAGATTGAATTTGAGAACTTGTGCAAGAACTCTGGTTTTTCCAAGTTTCATGTTGCATGTACTAGCTTATCAGCTGTGGGAGTGATGGAAGTAGTGAGAATGGGTTCAAACTCCAAAGAGAGTGAAGTTCCCTTAGAAGTAGAAAAGGTTGATGATTCATACCTTTCTGCTTTGTTGCTCTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAATGCTGCCATAGACATGAATTTGTTTGACGTCATAGCAAAGGCAAAGAGTTGTTGTGATGATGCAAGTTTTTCTGCCTCTCAAATTGCCTCTTTGCTTCCAAATCAGCACCCTCAATTGGCTGATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTGTTCTTCATTGCTCCATTCGCAGCAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCTCACCGGTTCGAGAATACTTTTCTTATGATCATGATGAAGGAACCTCTTTGGCTCCACTCTCAACCTTATTTCATCGAAAGAAGCAAAAGGTGCATATATGGACCCGAATTGCAGTGACCATTTCGAAAGTGTCTATGGAATGCCCTCATATGAATATATGGAGAAAGATACAGAGTTGA 1506 0.3991 MSSNSKDSEVPLEVEKLDDSYRSAVLLCFSNVLPAVLNAAIDINLFDVIAKAKSSCDDSSFSASQIASLLPNQHPQLANRLERMLPLLASYSLLHCSIRTNEDGKKERVYALSPVGEYFAYDHEGISMAPLSTLLHRGFHDLWKDAKGAFMDPNCSNHFESVYGMPSYQYMEKDTELNEMFFKAMAHAGPIEVKKVLKVYKGFEELSTLVDVGGGVGQTLKLILSAYPSIKGSICHNWADEDCIKFLRNCHNALPPHGKVIVMDYIIQEVPNSSDASKHSSIVDNHMLLAHGGRERTEIEFENLCKNSGFSKFHVACTSLSAVGVMEVVRMGSNSKESEVPLEVEKVDDSYLSALLLCFSNVLPAVLNAAIDMNLFDVIAKAKSCCDDASFSASQIASLLPNQHPQLADRLERMLPLLASYSVLHCSIRSNEDGKRERVYALSPVREYFSYDHDEGTSLAPLSTLFHRKKQKVHIWTRIAVTISKVSMECPHMNIWRKIQS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00072 501 Gene3D Vaccinia Virus protein VP39 121 233 IPR029063 -
Phac3g00072 501 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Phac3g00072 501 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 325 IPR029063 -
Phac3g00072 501 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 276 IPR016461 GO:0008168
Phac3g00072 501 Gene3D - 331 449 IPR036388 -
Phac3g00072 501 Gene3D - 1 119 IPR036388 -
Phac3g00072 501 PANTHER O-METHYLTRANSFERASE 234 310 IPR016461 GO:0008168
Phac3g00072 501 Pfam O-methyltransferase domain 233 311 IPR001077 GO:0008171
Phac3g00072 501 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Phac3g00072 501 SUPERFAMILY "Winged helix" DNA-binding domain 348 453 IPR036390 -
Phac3g00072 501 FunFam Caffeic acid 3-O-methyltransferase 333 449 - -
Phac3g00072 501 Gene3D Vaccinia Virus protein VP39 234 318 IPR029063 -
Phac3g00072 501 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Phac3g00072 501 Pfam Dimerisation domain 366 419 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00072 Phac-Chr3 599151 607478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00072 331 476 Monolignol Biosynthesis Gene Families AT5G54160 35.616 3.93e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00072 - - gmx:106794104 464.922