Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00048 ATGAAACTTTCTTTCTCTGTCCCTTCATCGAAACCCCAATCGAAGCCCAAACCAGTCAATTCCTTCGACGACACTTCCGCAGCTCAAAACGACGCCGCTGGATCCAAACACCTCATCACCGAATTCGATCCTTCCAAACCCGTTCCCTCCCTCGCCCCCAAAACCCTAATACCGCCAATCCAAAACCAATGGAAACCCTTCAAAAAGATGAAGAACCTCCACCTCCCCACCGCCGACCCCGAATCCGAAGCCCTCACATTCGAACTCCACGCCGCTGACGACCAACCCGACTCCGATGTCTCCTACGGCCTCAACCTCCGCGCCGACAAAAAAAGTGAGCAGAACAATGGTACCGCACTTCCGCCGCCGCCGCGCCGCGTTCCGGCGGAGAGCACGATGCTGCAGAAGCTGAAGGACGACCTGCTGAGGCTACCGGAGGACAAGGGGTTCGACGAATTCAAGGATGTCCCCGTCGAGGGTTTTGGCGCTGCGCTGCTGGCCGGGTACGGGTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTGAAGGTTGTGGAGATCAAGCGGAGAACTGCCAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGTAGCAATAATGACAAGGACAACAAGGACAAGGAGAAGAATGAGAAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCTGAAGGGTAGTGTTGTGTCTAGGATTGGGGATGATTATCTTGTTTTGGAGCTATCCAGGAGTGGAGAGAAGGTGAAGGTGAAGGTGGGCGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTCTGAGGAAATTGAAGGAGTCGAAGAGTCAGCGTGAGGATAGAGGGCCGAAGAGGAAGCATGACAGGGATGAGATGGAGGAGAATGGAGTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGGTCGCAGGGATATGGTTGAGAAGAGAATGAATGGTGGTCGGAGAGAGGAGAGGAGAGTGGTTGATCATAGGAAGGTTTCTTGGCTTACCAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCTATTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAAAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGATTTTCTGGAGACGGCTATTCCGAAACGTGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGAGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAGCTTGAACAAATTGCGGAGTATATGGGGGACCCAAGCTTGTTGGGACATTGA 1416 0.5268 MKLSFSVPSSKPQSKPKPVNSFDDTSAAQNDAAGSKHLITEFDPSKPVPSLAPKTLIPPIQNQWKPFKKMKNLHLPTADPESEALTFELHAADDQPDSDVSYGLNLRADKKSEQNNGTALPPPPRRVPAESTMLQKLKDDLLRLPEDKGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVRSNNDKDNKDKEKNEKKEKVVRIVGGRDAGLKGSVVSRIGDDYLVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKESKSQREDRGPKRKHDRDEMEENGVDVSRREERKGVGRRDMVEKRMNGGRREERRVVDHRKVSWLTSHIRVRVISRDLKGGLLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDREMAIVRDADTHELLNVKLEQIAEYMGDPSLLGH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00048 471 SMART kow_9 224 251 IPR005824 -
Phac3g00048 471 SMART kow_9 410 437 IPR005824 -
Phac3g00048 471 Pfam G-patch domain 145 201 IPR026822 -
Phac3g00048 471 PANTHER G PATCH AND KOW-CONTAINING 1 467 IPR045166 GO:0000398
Phac3g00048 471 MobiDBLite consensus disorder prediction 284 326 - -
Phac3g00048 471 MobiDBLite consensus disorder prediction 1 63 - -
Phac3g00048 471 ProSiteProfiles G-patch domain profile. 158 204 IPR000467 GO:0003676
Phac3g00048 471 MobiDBLite consensus disorder prediction 1 33 - -
Phac3g00048 471 MobiDBLite consensus disorder prediction 108 129 - -
Phac3g00048 471 Gene3D - 356 410 - -
Phac3g00048 471 SMART G-patch_5 156 202 IPR000467 GO:0003676
Phac3g00048 471 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00048 Phac-Chr3 418091 422502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00048 347 444 C2H2 Transcription Factor Family AT1G55460 32.653 2.72e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00048 K13101 - gmx:100784983 662.914