Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00028 ATGTCTCACATCCAAGGTCATGCCTGCACTCCACTCCATCAAATCTTTGCCTCCCCATCAGTTTCAATGTCCTCCATAGAACGCAGGTGGAGTGATACAACCCCTTATTCTTCCAAAAAGAAGCTTCAGTCTTGGTTTCAACTTCCGAATGGGGACTGGGAGCTGGGGAAGATGATAACAACTTCTGGAAATGAATCCATCATTTCACTGTCTGATGGGAAGACAAAAGCAGGGCCTGTTTTGGTTGCAATAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGGAATAACAGACACAGCCATCAGAGAAATGATACGGGGCTACTCTGAATCTTGGCCTGTTAATTTCTGCAGTCTGTTTCATGTAGCCAAATTGATAGGCTGTGACATTGAAGATCTCAAGTTGACTCTGTCAACTAGCAAGATGAAAGTTGGTAATGATAATGTTGTCCAAAAGTTGACACTATCACAGGCAATTGATGAAAGAGATGCTTTGCCAAAGTCAATATATGCATGCCTGTTTGATTGGGTGGTTGAACAGATAAATAAGTCACTTGCTGTTGGCAAAAGAAGTACTGGCAGACCAATCAGTATTCTAGATATCTACGGGTTTGAATCTTGCAATGAATATATTCAAGACGGCATTGACTGGGCCAAAGTTGAATTTGACGACAACCAAGACTGCCTTAATCTTTTTGAGAAGCTTGCTGGTGGTACAGCTTCAATGCAACAACTAAGAAATGGCTTGAGAAAGACTTGCTAG 816 0.4105 MSHIQGHACTPLHQIFASPSVSMSSIERRWSDTTPYSSKKKLQSWFQLPNGDWELGKMITTSGNESIISLSDGKTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYGITDTAIREMIRGYSESWPVNFCSLFHVAKLIGCDIEDLKLTLSTSKMKVGNDNVVQKLTLSQAIDERDALPKSIYACLFDWVVEQINKSLAVGKRSTGRPISILDIYGFESCNEYIQDGIDWAKVEFDDNQDCLNLFEKLAGGTASMQQLRNGLRKTC* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00028 271 Gene3D Myosin VI head, motor domain, U50 subdomain 138 202 - -
Phac3g00028 271 ProSiteProfiles Myosin motor domain profile. 1 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac3g00028 271 SMART MYSc_2a 56 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac3g00028 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 253 IPR027417 -
Phac3g00028 271 Gene3D Kinesin motor domain 203 223 IPR036961 -
Phac3g00028 271 Gene3D Kinesin motor domain 19 129 IPR036961 -
Phac3g00028 271 PANTHER MYOSIN 75 124 - -
Phac3g00028 271 Pfam Myosin head (motor domain) 75 124 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac3g00028 271 Pfam Myosin head (motor domain) 139 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac3g00028 271 Gene3D - 224 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00028 Phac-Chr3 205311 213522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00028 136 260 Myosins gene family AT1G50360 60.645 7.45e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00028 - - gmx:100781736 201.06