LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g04970	ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTCGATGACCTCCGTCTCAGGAAACAACGAATGCCTTCGTCTCACACTTCAAACCAATCCCACCATTTCCCCATAGATGCATATGCTTACACAAAACAAGCATACAGAGGATCCAGAAACACAAAAGCTAATGGAATTATGACTTCCAGAACTGGGGTGATGCCGAATAGTTCTAGTAGAAGCCACAGATCAGTAAATAATGGGCAAGTTTCAAACCAGATGGTTCCATATGGGAAAGGTCAGAGCTCAAGGCAAACTGGTGATATGTCCCTTGCCCTGGCTTTTGCCTTTGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCACATTAACAGAGGAACATTGGAATTTAGCATGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTATCCAAATAAACGAGATATCCAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGCTCCAATGGCCTTAATATGGACACATATTCAATACAATTTGCAAAGGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGGTTACCTCGCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGAGGACAACGATGACACAGGGATGGAAATGCAACTGACAAGACCAACTTTCTCTTTTGACAAACATACTACTCAGAACACCCAACAACTTGGAAAGGCTATTTTCATGCAAAGGCCAATTACTCTTACCAGCTCAAAGGAAGGCAACAACTCAAATAATGAGAACAAAACTGTGAAGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGGCATTAAGAATGTGAATGCTATTTCGGAAGGGAAAAATCTAACGGCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTTATAGCCAAATTAATGGGGCTGGACATCCTTCCTGACAGAGTGGAAATGGAATCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCAAAAGGAAGCACAAAGAAGACTGAACTGCAGAGAAAAGAAGCAGATAATTTGGTGCCTATAAAAAACCAAAAAGATATAGAAGCCTTCAGAACGCCTGCAACTCAGGGTGAAGTGATATCTGGGGCAAATAAAATTTTGCTTGTAGAAAAAACCAGCTCTGAATTGTCTCTTCAGAATGGAAAACCACTGTTGAGAGACCTGGATGGAATAAAAGCTCTGAATGGATTTGACAAGCCCAGCATAAAAGTTGTCAAGCAGACTAAAAGTTCCGCTGAAAAGAATCTTACTAGAGAAGGTCAAAAGGATGTTCAGGAGATAGTAAGAAAAAAGGATCACCCGAATAACAATAACAGGGAACAGAAAGGCACTGTAAAGGGCAGAACCGACTATCCTGTTCTTAACAATATGCTATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGTCCTCGATTCAGGAAGACAAGGACGTCAATGCAGACACTCTTCAGCCTGAAAAAAGACGCACTAACAAGAACATCATGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACACGTACACTCCAAAAATGGGCTTCATGAAGAAAAGCATCACAGAGAACAACAACTCCAGGTGAGGGAAGAACAAATGCTGATGATGAGACAACAAGGAGGGAGTGAAATCACATCAAAGAATTCACCAAAATCCACTCCTCAGAAGAAGCAGCTATGCATGAACCAGGCCGCACTGTTCAAGAAAAACTCTGGAGAAAAAAGTGTAGCTGCTATGAAATCGGAAGGCCTTTTAACTAATCATTATGATCTAGTCAGAGATGAAGCATCCAATTACACAAATGAGAAAGTAAAAGAAATTGTCCATAGAAAGTCAGGCCAAATTTTTTCTCCAAGAGATCAAGAATACGAACGAGCTAAGCAAAGTGGCATTAGAACTTTGATGGATGAAAAACATGTCTATAAACTGTCTAGCAAGAAAATTAAGAATACCAGAAAGCAAAATGTAGACGTGATTGGAAAGATTGATCATGTGTTGACTAGAAGAAAGGGAGCCAAGCTTATCAATAAACTAGGAAAACGGCAGATTCCCACTTCTGACAAATTTGAAGTTTTGAATGAACCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACAGATGCACACATCATTAGCCCCAATGAACAAGTATATGTGGATGCTACTGAACCATTGGATGTGAAGCACCAACCCCACAAAGAAGCTGAACTACCTCCTACATTATCCAGTTCTGTTGGTGGAGAACATCAAAGCCAAGAAAATTTGGTAGCAATAGTTCCCAGTGATTTGCATTGTCAGGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAAGTTGCATTACAGAGAACAAATGGAATTCAGGAAGACAGACTGTGTGTTGAGCACTCAAACGTAGAAGATAAGAATATTTGTGAAAAAAGCTTCCAAGAGCCACTAACAGAAAGTGAAAACTGCCTGAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGTAGAAGGACTTTTCAAACTGAACATCCCATTTAACGTTCTTCAAGGTGGTGGTCGGGAGATTCAAGACGAAGATAGCAAACTCATATTAGATTGTGGGTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAAAAGTTCATAGTTATTCAGGGATAGTAATGGGTACCACCAACATAATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACATGGAGAAGCTCAAGTTCTACGGTAGGAAAAAAAGCTGCCAATTTGATGTTGATGACAACCTATCCCAAAGGCTTGAAAATGATGTTTATGACAAAGATCCAGACGTGAACTGCATGTGGGATCTAGGTTGGAATGATGAGACAGTTGCATTTATCGAGAAATACGAAGTTATAAGGGATGCCGAAAAGCATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGATTTTTGCATGTTCAATCATACACCGAAACAGTAA	3150	0.4003	MAKRSDFAQKLLDDLRLRKQRMPSSHTSNQSHHFPIDAYAYTKQAYRGSRNTKANGIMTSRTGVMPNSSSRSHRSVNNGQVSNQMVPYGKGQSSRQTGDMSLALAFAFENGGKLKRSDSIMGFLHHINRGTLEFSMSERQLASTSNYPIQINEISKGAHKLNQILRACSNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMVTSQKKNRITLLEEDNEDNDDTGMEMQLTRPTFSFDKHTTQNTQQLGKAIFMQRPITLTSSKEGNNSNNENKTVKRQVSQKRSTKTSSISTSGIKNVNAISEGKNLTASNPEKGRIPNVIAKLMGLDILPDRVEMESKHVMLQKREGISPKHTAKGSTKKTELQRKEADNLVPIKNQKDIEAFRTPATQGEVISGANKILLVEKTSSELSLQNGKPLLRDLDGIKALNGFDKPSIKVVKQTKSSAEKNLTREGQKDVQEIVRKKDHPNNNNREQKGTVKGRTDYPVLNNMLSQLEQVKERSEVKSSIQEDKDVNADTLQPEKRRTNKNIMNNEKKSRNNNGIQKTHVHSKNGLHEEKHHREQQLQVREEQMLMMRQQGGSEITSKNSPKSTPQKKQLCMNQAALFKKNSGEKSVAAMKSEGLLTNHYDLVRDEASNYTNEKVKEIVHRKSGQIFSPRDQEYERAKQSGIRTLMDEKHVYKLSSKKIKNTRKQNVDVIGKIDHVLTRRKGAKLINKLGKRQIPTSDKFEVLNEPEQERISLFRETDAHIISPNEQVYVDATEPLDVKHQPHKEAELPPTLSSSVGGEHQSQENLVAIVPSDLHCQDVLSLQDPVAADERFVTGEVALQRTNGIQEDRLCVEHSNVEDKNICEKSFQEPLTESENCLKWILVMSQLFVNTVEGLFKLNIPFNVLQGGGREIQDEDSKLILDCGYEVMKRKGIRQELKKVHSYSGIVMGTTNIIISFDELVRQLNKDMEKLKFYGRKKSCQFDVDDNLSQRLENDVYDKDPDVNCMWDLGWNDETVAFIEKYEVIRDAEKHILSVLLDEITLDFCMFNHTPKQ*	1050

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	268	300	-	-
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	54	94	-	-
	Phac2g04970	1049	Pfam	DUF761-associated sequence motif	324	340	IPR032795	-
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	454	488	-	-
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	511	540	-	-
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	511	552	-	-
	Phac2g04970	1049	MobiDBLite	consensus disorder prediction	450	491	-	-
	Phac2g04970	1049	PANTHER	OS01G0228800 PROTEIN-RELATED	8	1041	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g04970	Phac-Chr2	45657493	45666701	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g04970	1	387	TRM (TON1 Recruiting Motif) Superfamily	AT5G42710	35.910	3.25e-49	186

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g04970	-		-	pvu:PHAVU_002G333000g	1946.01

Showing 1 to 1 of 1 entries