Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04965 ATGGAAGGAGGATCTGCCCAGAAGTGGAAGAGTTTCTACAGAGAGTGCTTGAGAAACCATGCAGCCAGCCTCGGAAGCTACGCCACCGACGGCTGCGGGGAGTTCACGCTCGACACCGGGGGCCTGCAATGCGCGGCCTGCGGCTGCCACCGCAATTTCCACCGGAAAGTGAAGTACCCGGTAGGCCCGGAAAGTCCTGGAGCGATGGATTACGGCGGCGAGGGGGGGAGTAAGAAGCGGTTCAGGTCGAAGTTCAGCGCAGATCAGAAGGAGAAGATGCTGGCGTTTGCTGAGAAGCTTGGTTGGAAGCTTCAGAGGAAGGATCTGGATGATGAGATTGAGAGGTTCTGCAGAAGCATTGGAGTGAGTAGACAGGTTTTCAAAGTTTGGATGCATAACCATAAGAACTCTTCTTCCTCTTCTTCTGCTTCTGCTTCTGCTTCTGCTTCCACCGGAAACATCTTCTCCCTCAGCCACTGA 480 0.5458 MEGGSAQKWKSFYRECLRNHAASLGSYATDGCGEFTLDTGGLQCAACGCHRNFHRKVKYPVGPESPGAMDYGGEGGSKKRFRSKFSADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSIGVSRQVFKVWMHNHKNSSSSSSASASASASTGNIFSLSH* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04965 159 Gene3D - 67 142 - -
Phac2g04965 159 FunFam Zinc-finger homeodomain protein 2 68 140 - -
Phac2g04965 159 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 137 - -
Phac2g04965 159 Pfam ZF-HD protein dimerisation region 12 57 IPR006456 -
Phac2g04965 159 NCBIfam homeobox domain, ZF-HD class 78 136 IPR006455 -
Phac2g04965 159 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 13 56 IPR006456 -
Phac2g04965 159 SUPERFAMILY Homeodomain-like 67 136 IPR009057 -
Phac2g04965 159 MobiDBLite consensus disorder prediction 136 159 - -
Phac2g04965 159 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 13 57 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04965 Phac-Chr2 45612985 45614082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04965 13 137 ZF-HD Transcription Factor Family AT4G24660 44.706 2.62e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac2g04965 ZF-HD_dimer 9.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04965 - - pvu:PHAVU_002G332400g 306.99