LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g04954	ATGGATTCTCATCACTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCATTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACTGCACCTTTATATGTATTTGGGACAATGCGAGGGATAGATCTTGCAGCAGATGAGGAAGTCGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACAATAATTTCCCTGGTGAAGTATGCCTCTATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCATTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACAGAAGTGCAAACGAGGTTATGCTTTACGAGGAGAAAAGTTCTTCTAAGATCAAAGCCGATTCAAGAGCCCGAAGGGCCATTGAGAAGCACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTCGGTTCCTGCATGACCATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAACTGGAGTTCAGAGATCCTTGACAGACATATTGAAAAACATATTTGCCTCTTCACAACATACTCAGGACTCCGTGTCAAACGCTCTAAAAACATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAACATTGCGGTACACGTAAAATTGGGATCATGTTTGGACCAATAATTACTGCTTGGCTGCTGTTTGTCGCTGCAGTGGGAACCTATAACATTTTCAAGTGGGATGTAAAAATTATCTATAAAATATCCCCAATCTACATATACAAATTCATCACAAAAATTGACATCCCCAGATGGAGATTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGATCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTGATCTATCCGCTTCTTCTTTTATGCTATGCTGGTCAGGCTGCATATATCTCCAAAAATTTAACTGCTCCTGATTTTAATCATCTTAGTCAATCTATGCCAGATCATTGCAAACACTTGTACATAGTATTATCCCTTCTCTCTTCAGCCGTGGGAAGCCAAGCTACCATAACTGCTTGTTTTTCCATCATTAACCAGTGCCTGGCATTGAATTGCTTTCCCAGAGTAAAAGTAATTCACACATCAAAAACTATAAACGGGCAGATTTACATCCCCGATGTCAACTGGTTATTGATGATTTTCAGCCTCACTGTCACAATTGGTTTCAGAGACATTGTCAAAATTGGCAATGCAACAGCTTTGGCTATTATATGTGGAATGCTTGTGACAACCAGTCTGATGTCACTGGTCATTGCTTTGTATTGGGAGAAGGATTTGATGGTGTCTGCGTGCTTTCTTCTATGTTTTGGGTTCCTAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTACTTGCAGTTTCCATGACAGTCATGCTTTCATGGCATTATGGAACCATGAAGAAGTACAAGTTTGATTTGCAAAACAAAGTATCAACCGAGTGGCTAATAGATATCAGTCCAGGCCTTGGAATTTCCCGAGTACCCGGCATTGGCTTCATTTACACCGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTCATTACAAATCTTCCTGCATTCCATCAAGTGTTGATCTTGGTATCATTCAAGTCTATACCCGTGCCTTACGTCTCAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGCCCAAAGGATTACAAAATATATCGCTGCATTGTGAGAAGTGGATACTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGAAGATTATTCGTTCTATAGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCCATGGTGTGCCCAGATGAAAGAATGATCTTTGTTGGACATAGAAGGGTTGATGGAAATGGTTTAGTCCCTTTGGATGATTTAGACTCATCAAGCATGGGGCAAAGCCAGGTGAACAATGAATCTCAGATAAGTCCGGTAGATGAGTCGTTGGAGAGTAGCAGTGGTTGTAAAAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTGAGGAAGGAGCTCTTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGGCAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTCTATCGTTTCAGTGAAAAAAATTGTAGGGAACCTCCTGTGGCTCTCAAAATCCCTCATGCTGCTCTTGTAGAGGTTGGTGTGATATGTACCATATAG	2370	0.4156	MDSHHFDQDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRGIDLAADEEVVYELFSFIFWTLTIISLVKYASIVLKADDEGEGGIVALYSLLCRNAKVGLLPCDRSANEVMLYEEKSSSKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQRSLTDILKNIFASSQHTQDSVSNALKTYVPVPSACVILVGLFMLQHCGTRKIGIMFGPIITAWLLFVAAVGTYNIFKWDVKIIYKISPIYIYKFITKIDIPRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYISKNLTAPDFNHLSQSMPDHCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATALAIICGMLVTTSLMSLVIALYWEKDLMVSACFLLCFGFLEAAYLSACLLQFHKGSWYLVVLLAVSMTVMLSWHYGTMKKYKFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVSESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESMVCPDERMIFVGHRRVDGNGLVPLDDLDSSSMGQSQVNNESQISPVDESLESSSGCKKRKKVRFMLPHNSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVICTI*	790

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g04954	789	MobiDBLite	consensus disorder prediction	670	692	-	-
	Phac2g04954	789	Pfam	K+ potassium transporter	22	611	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phac2g04954	789	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	7	786	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phac2g04954	789	MobiDBLite	consensus disorder prediction	670	693	-	-
	Phac2g04954	789	NCBIfam	potassium uptake protein	20	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g04954	Phac-Chr2	45573314	45580153	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g04954	1	789	Inorganic Solute Cotransporters	AT1G70300	45.025	0.0	688

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g04954	K03549		K12236	gmx:100801073	1386.32

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac2g04954	2	45573314	45580153	Phac2g04954	2	45573314	45580153	ECH

Showing 1 to 1 of 1 entries