Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac2g04952 | ATGAGCTCGCAAGAGCGAAGCCAGCGGTCTAGGGTTCCTCGTCAGGAATGGATTCGTCGAGGATCCAACGATCAGAATCAGAATCAGAATCAGAATCTGAATCAGAATCAGAATGGTGCCGCTGCTGCTGTTGCTGGTTCCTCCAATACAACAAATCGCCACAGGAGGAGCGCTCCTATTCCTAGTCACAATCCCAATCCTAATCCCAATCCCAATCCTGTTCCTAATCCGAAGAGTAATGTGCAGAAGAGATTCAATTTGAGGGACTCTAATTTGCCTCAGCTGCTGCAAGAGATCCAGGACAAGCTCGTCAAAGGTGCTGTCGAGTGCATGATTTGCTGTGACATGGTGCGGAGGTCTGCTCCAATCTGGTCTTGCTCCAGTTGTTTTTCCATCTTTCACCTCAATTGTATAAAGAAGTGGGCGCGTGCACCCACTTCTGTGGATGTGTCTGTTGACAAGAATCAGCGGTTCAATTGGCGGTGCCCTGGTTGTCAATCTGTGCAGCTCTCATCATCCAAGGAGATTCGGTATGTTTGCTTCTGTGGGAAGAGGCCTGACCCCCCCTCCGATTTGTATCTCTTGCCACATTCCTGTGGAGAACCATGTGCCAAACCTCTTGAAAGGGAGATCGGCGGGGATAAGGAGGTTCTTTGTCCTCATGTTTGTGTCTTGCAATGCCATCCCGGTCCTTGCCCTCCTTGCAAAGCGTTTGCCCCTCCACGTTTGTGTCCTTGCGGGAAGAAAAATATCACCACCCGTTGCTCTGACCGCCAGTCTGTTCTTACCTGTGGCCAGCGCTGTGAAAAGCTTCTTGAATGTGGGCGTCATCGGTGTGAGCAAATCTGTCATCTGGGACCTTGTGATCCTTGTAAGATTCCAGTCAATGCCTCTTGCTTTTGCAGTAAAAGGACGGAGTCCATTCTTTGTGGGGACATGGCTCTGAAAGGTGAAATCAAAACCGAAGGTGGAGTTTTCTCTTGTGGTTCAACCTGTGGAAAGAAACTTGGTTGCGGTAATCATATTTGTATCGAGACCTGTCATCCCGGCAGCTGTGGGGAGTGTAGATTATTACCATCCCATATTAAGACATGCTGTTGCGGGAAAACTAAATTGAAGCAGGAACGGCAGAGTTGTTTAGACCCTATACCTACCTGTTCACAAGTATGTGGGAAGACCCTTCCTTGCGGGATTCATCGCTGTGAAGAGGCATGCCACGCTGGGGATTGTTCTCCTTGTCTGGTTCTAGTCTCCCAGAAATGTCGATGTGGCTCTACTTCCCGAACCGTGGAGTGCTGTAAGACAAAAGTGGATGCTGTGAAATTTACTTGTGAAAAGCCTTGTGGGCAGAAAAAGAATTGTGGAAGGCATAGATGCAGTGAACGATGTTGTCCACTTTCTAATCCAAATAATGTTCAAATTGCGGATTGGGATCCTCACTTCTGTTCATTGCCATGTGGAAAGAAGCTAAGGTGTGGGCAGCATGCATGTGAATCTCTATGCCACAGTGGTCATTGTCCACCTTGTCTTGAAACTATATTTACTGATTTGACATGTGCCTGTGGGAAGACTTCAATCCCTCCTCCATTGCCTTGTGGCACACCTCCTCCCTCGTGTCAGCTTCCATGTTCTGTTCCTCAGCCTTGTTTACATCCAGCGTCTCACAGCTGCCATTTTGGAGATTGCCCTCCTTGTTCGGTGCCTGTAGCAAAAGAATGTATTGGTGGGCATGTAATTCTTCGGAACATACCTTGTGGTTCAAAGGATATTAGATGCAATAAACTCTGTGGGAAGACTAGACAGTGCGGTTTACATGCATGTGGCAGAACATGTCACCTTCCACCTTGTGATAATCCATCTGCAGTGCCGGGTACCCGTGCCTCTTGTGGGCAAACATGTGGTGCTCCAAGAAGAGACTGTCGGCATACATGTACAGCTCCTTGTCACCCTTCAACTCCATGTCCAGATACAAGATGCGAATTCCCTGTCACAATTTCATGTTCTTGTGGCCGAATAACAGCGAATGTTCCTTGTGATGCTGGTGGAAACTGTGCTAATTATAATGCTGATGCTGTACATGAAGCTTCCATTATTCAAAAGTTGCCTGTGCTGCTTCAACCTGTTGCTGCAAATGGAAAGAAAGCTCCCCTTGGACAAAGAAAACTGATGTGTAATGATGACTGTGCTAAGTTAGAGCGTAAACGGGTTCTTGCTGATGCCTTTGAGATTACCGCTCCAAATCTGGATTCTCTCCATTTTGGTGACAATCCTGTTGCTTCTGAATTGCTTGCTGACATGTTGAGACGTGATCTTAAATGGGTTTTATCTGTCGAGGAGAGATGCAAGGTTTTGGTTCTTGGCAAGAACCGGGGAAATACACAAGGTCCAAAAGTCCATGCTTTCTGTCCCATGTTAAAGGACAAAAGAGATGCAGTGAGGGTCATAGCTGAAAGATGGAAACTTGCGGTGTATGTAGCTGGTCGTGAGCCAAAGCGTTTTGTACTTGTTCATGTTACCCCCAAATCAAGAGCTCCTACTCGTGTGCTAGGGGTTAAGGGCACGACAACTGTAAATGCACCCATTCCTCCTGCATTTGATCCGTTAGTAGATATGGATCCTCGGCTTGTTGTCTCTTTTCTAGACTTGCCAAGGGAGGCAGATATCAGTGCATTGGTGTTGAGATTTGGTGGTGAGTGCGAACTTGTTTGGTTGAATGACAAAAATGCACTGGCTGTTTTTAACGATCCAGCCCGAGCCGCAACTGCACTAAGGAGGTTGGATCATGGTACTGTTTATCAGGGAGCCGTGGTCGTGATTGTTCCGAATGTTGGGGCATCAGCAGCATCTTCAGCTACCAATGCGTGGGGAGGATCTGGGACAATGAAAGGAGGAGGATCTCTGGCAGCATTGAAGGGTAATCCGTGGAAAAAAGATGTTGTTCAAGAGCCAGGTTGGAAAGATTCTTGGGGCGATGAGGAGTGGGCTACTGGTTCTGCTAATGTCCATTTGCCTATTCAGAAGAAAGAAACCCTCATATCTGCTTCAGTAAACCCTTGGAGTGTCTTGAATCAAGAATATTCTTCAAGTTCATCCACCGCAGCTGTTAAAATTGATGTTTCTAGGGAACACTCAGAAAGTAGTTCTGTAACAAACTTGGAGCCTCATAATGGCGGTTCAAGTGTAGGAGGACAGCATGCAGGAAACTTGCATACTTCAGAAGATTCTGAGGTAGTAGATGATTGGGAGAAGGCTTGTGAATAG | 3261 | 0.4701 | MSSQERSQRSRVPRQEWIRRGSNDQNQNQNQNLNQNQNGAAAAVAGSSNTTNRHRRSAPIPSHNPNPNPNPNPVPNPKSNVQKRFNLRDSNLPQLLQEIQDKLVKGAVECMICCDMVRRSAPIWSCSSCFSIFHLNCIKKWARAPTSVDVSVDKNQRFNWRCPGCQSVQLSSSKEIRYVCFCGKRPDPPSDLYLLPHSCGEPCAKPLEREIGGDKEVLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKNITTRCSDRQSVLTCGQRCEKLLECGRHRCEQICHLGPCDPCKIPVNASCFCSKRTESILCGDMALKGEIKTEGGVFSCGSTCGKKLGCGNHICIETCHPGSCGECRLLPSHIKTCCCGKTKLKQERQSCLDPIPTCSQVCGKTLPCGIHRCEEACHAGDCSPCLVLVSQKCRCGSTSRTVECCKTKVDAVKFTCEKPCGQKKNCGRHRCSERCCPLSNPNNVQIADWDPHFCSLPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLTCACGKTSIPPPLPCGTPPPSCQLPCSVPQPCLHPASHSCHFGDCPPCSVPVAKECIGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHLPPCDNPSAVPGTRASCGQTCGAPRRDCRHTCTAPCHPSTPCPDTRCEFPVTISCSCGRITANVPCDAGGNCANYNADAVHEASIIQKLPVLLQPVAANGKKAPLGQRKLMCNDDCAKLERKRVLADAFEITAPNLDSLHFGDNPVASELLADMLRRDLKWVLSVEERCKVLVLGKNRGNTQGPKVHAFCPMLKDKRDAVRVIAERWKLAVYVAGREPKRFVLVHVTPKSRAPTRVLGVKGTTTVNAPIPPAFDPLVDMDPRLVVSFLDLPREADISALVLRFGGECELVWLNDKNALAVFNDPARAATALRRLDHGTVYQGAVVVIVPNVGASAASSATNAWGGSGTMKGGGSLAALKGNPWKKDVVQEPGWKDSWGDEEWATGSANVHLPIQKKETLISASVNPWSVLNQEYSSSSSTAAVKIDVSREHSESSSVTNLEPHNGGSSVGGQHAGNLHTSEDSEVVDDWEKACE* | 1087 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 1044 | 1071 | - | - | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 274 | 292 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 221 | 236 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 338 | 356 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 557 | 566 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 602 | 617 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 633 | 658 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 492 | 509 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 396 | 413 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | Pfam | NF-X1 type zinc finger | 454 | 465 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 199 | 257 | - | - | |
| Phac2g04952 | 1086 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 | 16 | 992 | IPR034078 | GO:0003700 | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 328 | 371 | - | - | |
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 19 | 61 | - | - | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 219 | 237 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 396 | 415 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 492 | 511 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 602 | 631 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 640 | 661 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 338 | 357 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 549 | 567 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 454 | 484 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | SMART | znfxneu3 | 274 | 293 | IPR000967 | GO:0005634|GO:0008270 | |
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 1072 | 1086 | - | - | |
| Phac2g04952 | 1086 | CDD | RING-CH-C4HC3_NFX1-like | 109 | 166 | - | - | |
| Phac2g04952 | 1086 | ProSiteProfiles | Zinc finger RING-type profile. | 110 | 166 | IPR001841 | - | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 264 | 312 | - | - | |
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 62 | 76 | - | - | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 482 | 525 | - | - | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 539 | 587 | - | - | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 629 | 678 | - | - | |
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 1039 | 1086 | - | - | |
| Phac2g04952 | 1086 | ProSiteProfiles | Zinc finger PHD-type profile. | 107 | 168 | IPR019787 | - | |
| Phac2g04952 | 1086 | CDD | NF-X1-zinc-finger | 386 | 434 | - | - | |
| Phac2g04952 | 1086 | SUPERFAMILY | RING/U-box | 100 | 169 | - | - | |
| Phac2g04952 | 1086 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | NF-X1 | Phac2g04952 | zf-NF-X1 | 1.7e+02 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac2g04952 | K12236 | - | gmx:106799700 | 1927.14 |