Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04950 ATGCTGCCTCACAAGCACACTCTCGTGGTTGTGGCGGCCACTCTGGCGCTCATGCTCGCCGCAGCATATGCAGATCTGGCCTCCGAGCGAGCCGCATTGCTCGCTCTCCGCTCTGCTGTCGGCGGCAGAACCCTCTTCTGGAACGCCACCAGGGAGAGCCCCTGCACATGGGCCGGGGTCCAATGCGAGCGCGACCACGTCGTCGAGCTTCACCTCCCCGGCGTCGCTCTCTCCGGCCAAATCCCTGTCGGAATATTCGGCAATCTGACACAGCTGCGCACCCTCAGTCTCCGCTTCAACGCTCTGCGGGGTTCCCTGCCTTCAGATCTGGCGGCGTGCGTTAACCTTCGGAACCTGTACATTCAGCGGAACCTCCTCAGCGGGGCAATCCCAGCGTTCTTGTTCGAGTTACCCGACCTGGTTCGGTTGAACATGGGCTTCAACAACTTCTCGGGCCCGTTTCCGACGGGCTTCAACAGCCTAACCCGGTTGAAGACTTTGTTTGTGGAAAACAACCAGCTCTACGGCCCAATCCCCGACCTGGGGAAATTGAGCCTGGATCAGTTCAACGTCTCCAACAACCTCCTCAACGGCTCTGTCCCTCTCAAGCTTCAGACATTCCCTCAGGATTCCTTTCTTGGCAACTCCCTCTGTGGCCGCCCACTCTCTCTCTGCCCCGGAGATATAGCCGATCCTATCTCCGTCGACAACAACGCCAAGCCCAACAGCAAAACCAACCACAAGCTATCTGCCGGCGCCATTGCGGGGATTGTTGTCGGATCGGTCGTGTTTCTTCTGCTGCTCGTGTTCCTCTTCATTTTCCTGTGCAGGAGCAAGACTGCCAAGAAGACCAGCGCCGTCGACATTGCTGCTGTCAAACATCCTGAGGCCGACGCCCAGGTTCTTGCTGATAAGGGGCTTCCGGATGTCGAGAACGGCGGTCATGCCAACGGCAATTCTGCGGTGGCTGTGCCCGTGGCTGCGGTTTCGGCGGGGAATAAGGCCGAAGGGAACAGTGGTGGGGCGGCGAAGAAGTTGGTGTTTTTCGGTAATGCGGCTAAGGCGTTTGATTTGGAGGATTTGCTCAGAGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTCGGGACGGCGTATAAGGCGGTGCTGGAGGCAGGGCCCGTGGTGGCGGTGAAGAGGTTGAAGGATGTGACGATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAAGCAGTTGGAGCTATGGATCATGAGAGTTTGGTTCCTCTCAGAGCTTTCTATTTCAGCAGAGATGAGAAGCTCCTTGTCTATGATTACATGCCCATGGGAAGCTTGTCTGCACTTTTACATGGAAACAAAGGGGCGGGTAGGACGCCACTGAATTGGGAAGTGAGATCAGGCATTGCACTTGGAGCAGCCCGTGGCATTGAGTACCTGCATTCACGAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCCAACATCCTCTTAACCAAATCATATGATGCCAGAGTGTCTGACTTTGGCCTTGCACATCTGGTTGGCCCCTCCTCCACCCCCAACAGGGTCGCCGGCTACCGTGCACCTGAGGTGACTGATCCTCGCAGGGTGTCTCAGAAGGCAGACGTGTACAGTTTTGGTGTGCTACTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTAGACCTTCCCAGATGGGTTCAATCTGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTGGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATAGAAGAGTTGCGAAGGTCTAGCCTTAAAGAGGAGCAGGAGCAGGACCAAATCCAACATGATCCCGTCAATGATATAGAATTGTAG 1971 0.5469 MLPHKHTLVVVAATLALMLAAAYADLASERAALLALRSAVGGRTLFWNATRESPCTWAGVQCERDHVVELHLPGVALSGQIPVGIFGNLTQLRTLSLRFNALRGSLPSDLAACVNLRNLYIQRNLLSGAIPAFLFELPDLVRLNMGFNNFSGPFPTGFNSLTRLKTLFVENNQLYGPIPDLGKLSLDQFNVSNNLLNGSVPLKLQTFPQDSFLGNSLCGRPLSLCPGDIADPISVDNNAKPNSKTNHKLSAGAIAGIVVGSVVFLLLLVFLFIFLCRSKTAKKTSAVDIAAVKHPEADAQVLADKGLPDVENGGHANGNSAVAVPVAAVSAGNKAEGNSGGAAKKLVFFGNAAKAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEAVGAMDHESLVPLRAFYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEEQEQDQIQHDPVNDIEL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04950 656 CDD STKc_IRAK 369 632 - -
Phac2g04950 656 FunFam pollen receptor-like kinase 1 332 437 - -
Phac2g04950 656 FunFam Probable inactive receptor kinase At1g48480 438 641 - -
Phac2g04950 656 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04950 656 Gene3D Transferase(Phosphotransferase) domain 1 438 654 - -
Phac2g04950 656 SUPERFAMILY L domain-like 47 205 - -
Phac2g04950 656 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Phac2g04950 656 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Phac2g04950 656 MobiDBLite consensus disorder prediction 635 656 - -
Phac2g04950 656 Gene3D Ribonuclease Inhibitor 139 225 IPR032675 -
Phac2g04950 656 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Phac2g04950 656 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Phac2g04950 656 SUPERFAMILY Protein kinase-like (PK-like) 367 634 IPR011009 -
Phac2g04950 656 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Phac2g04950 656 PANTHER OS05G0588300 PROTEIN 10 639 - -
Phac2g04950 656 ProSiteProfiles Protein kinase domain profile. 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04950 Phac-Chr2 45554099 45557677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04950 25 633 Receptor kinase-like Gene Family AT1G48480 64.839 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac2g04950 Pkinase 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04950 - - gmx:100818955 1069.68