Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04949 ATGGCGAGGCCAGAAAGAACGCGTAGAAATAAAAGCCTGGAGACTCTAATGGACTCGGACAAACCAGGAATCGGAAGAAATGTGAACCAACTGGGACCCCAGAAGTCCACTCCTGGCAATGGCCTTGAATTCAGTAACCTCTCGTATAGCGTTATAAAAAAGCAGAAAAAGGATGGAGTATGGATCAAGAAAGAAACATATCTTCTTCATGACATCTCTGGCCAAGCAATAAAAGGTGAAGTTATGGCAGTCATGGGGCCTAGTGGTGCTGGAAAATCCACCTTTCTTGATGCATTGGCTGGGAGAATTGCTAGAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAATTACTACAAGCTACATGAAAATGGTCTCATCATATGTGATGCAGGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCTGAAGTTCGGCTTCCTCCTTCCATTTCCAGGGCTGAAAAGAAGAAGAGGGTGTATGAACTCCTTGACCAACTGGGCTTACAGAGTGCTACACATACATATATTGGTGACGAAGGAAGGAGAGGAGTGTCAGGAGGGGAACGACGAAGAGTATCTATTGGCATAGACATCATCCATAAGCCATCAGTTCTGTTTCTTGACGAACCTACCTCGGGCCTTGACTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCGTTGTCCTTATGACCATACACCAGCCTTCATTTAGAATTCAAATGCTCCTGGATCAGATCACCGTCCTTGCAAGGGGAAGATTGATATACATGGGGAAGCCAGATGCACTACAGGCTCACATGTCAAGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAAGTGAATATGATCAAGCAACAGTTGGGCTTGACCCCCTAATCCAATTCCAACGTGATGGCCTCAAACCTGACCCAGCAGCCATGACCCCTGTTCCAAAAACTCCAAGGACACTTTTCAGAAGGAACACCCCTGCATCTAAACACTTGATTAGCCTACGCAGCCAAGGATTTATTGCTGGAACACAACAACCTCATTCTGCACAGTTTAGTTATCGCGACGACGAAGATGATGATGAGAATTTCGATAACTCCCTTGAAAGGAATACTGTTCCAACACCAAGGAATATGACCAGTGGTGTTCACCCACGTTTGGCTAGTCAGTTCTACAAAGATTTCTCAGCCAAAGATTTCTCTATCTGGCTTTACCATGGTGTCGTAGGAACGCCGCGGCGCCAACCATCATGGACTCCAGCAAGAACACCAGGATGGACGCCAGGGAAAACACCCATGTCAGGACCAAGAAGTGCAGTTTCCAACCAATATTCTGCAGCTTATCGGTATCCTTATCGCCCCAAAACTCCTGCAGTGGATGACCAGTCTATGGACTACTCGGCAAATTCATATGCCCCTTCGCTTGAAGGATTTCAGATTGAGCAAGTGCTTGATGAGCCAGTCTTAGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCGTGGCGAACAGCACTAAATGTAATTCGCACCCCGGAACTCTTCCTCTCCCGTGAGATTGTGTTAGCTGTAATGGCACTTATCCTGTCCAGCATTTTTGGAAATCTGAGTCATCATTCCTTCAAAGACATCAATAGGCTCCTCAATTTCTACATATTTGCAGTGTGCCTTGTTTTCTTTTCCTCCAATGACGCAGTCCCATCTTTTATCATGGAGAGGTTCATCTTCATCAGGGAGACTTCCCATAACGCTTACCGTGCTTCTTCATATGTTATTTCTTCCCTCATTGTTTACCTCCCATTTTTCGCTGTTCAAGGACTCACATTTGCTGCCATAACCAAAGAAATTCTCCACTTGAATAGCAATCTCTGGTATTTCTGGCTGACACTTTATGCCTCCCTTATTACTACCAACGCATATGTGATGCTTGTCAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCAAAGTCAGATACCCATTTATTGGAGGTGGCTTCACTATGTTTCTGCAATCAAATATCCATTTGAGGCTTTGCTCACAAATGAATTCAAGAACCTCGACTGCTACACAGGAAACAAAGCAGAATTATCCCCCGGACCATTAGGAGACTTGAAGCCCAGCAAACATCATAACACCAGCCTGCCAGCTAACTGCTTATTAGGGGTAGATATCTTGTCCTCAATGGATATCAAAATGCAAAACATATGGTATGACATTTTAATCCTGCTAGGTTGGGGTGTTCTTTACAGGTTGTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAACGAGAGAAAATGA 2439 0.4432 MARPERTRRNKSLETLMDSDKPGIGRNVNQLGPQKSTPGNGLEFSNLSYSVIKKQKKDGVWIKKETYLLHDISGQAIKGEVMAVMGPSGAGKSTFLDALAGRIARGSLEGSVRIDGKPITTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRAEKKKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSVLFLDEPTSGLDSTSAYSVVEKVKDIARGGSVVLMTIHQPSFRIQMLLDQITVLARGRLIYMGKPDALQAHMSRFGRPVPDGENSIEYLLDVISEYDQATVGLDPLIQFQRDGLKPDPAAMTPVPKTPRTLFRRNTPASKHLISLRSQGFIAGTQQPHSAQFSYRDDEDDDENFDNSLERNTVPTPRNMTSGVHPRLASQFYKDFSAKDFSIWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSGPRSAVSNQYSAAYRYPYRPKTPAVDDQSMDYSANSYAPSLEGFQIEQVLDEPVLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLAVMALILSSIFGNLSHHSFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAAITKEILHLNSNLWYFWLTLYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKQSQIPIYWRWLHYVSAIKYPFEALLTNEFKNLDCYTGNKAELSPGPLGDLKPSKHHNTSLPANCLLGVDILSSMDIKMQNIWYDILILLGWGVLYRLFFYLVLRFYSKNERK* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04949 812 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Phac2g04949 812 SMART AAA_5 78 278 IPR003593 GO:0016887
Phac2g04949 812 MobiDBLite consensus disorder prediction 436 460 - -
Phac2g04949 812 Gene3D - 41 288 IPR027417 -
Phac2g04949 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 287 IPR027417 -
Phac2g04949 812 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 799 - -
Phac2g04949 812 MobiDBLite consensus disorder prediction 366 403 - -
Phac2g04949 812 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Phac2g04949 812 CDD ABCG_EPDR 42 275 - -
Phac2g04949 812 Pfam ABC-2 type transporter 523 729 IPR013525 GO:0016020|GO:0140359
Phac2g04949 812 MobiDBLite consensus disorder prediction 1 16 - -
Phac2g04949 812 FunFam ABC transporter G family member 6 57 284 - -
Phac2g04949 812 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Phac2g04949 812 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04949 Phac-Chr2 45545943 45548933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04949 68 289 Calmodulin-binding Proteins AT2G36910 27.826 1.80e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04949 K05681 - gmx:100819497 1417.91