Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04939 ATGTCTTCTCTCCTAGATGATTGCAGGGAACACTTATTGGAAGTGGATGCAAATGCGAAACTAAAATTCCAGATAAGAAATCTGACGAGAGTTTCCCACGATGGGGTTTCAATCCTCAAAGGCATCAACCTTGATATCCCAAAGGGTGTCACCGTTGGGATCATAGGCCCCAGCGGCAGCGGCAAGTCAACGCTCTTGAGAGCCTTAAACCGCCTCTGGGAACCCCCCTCCGCCTCCGTCTTCCTCGACGGCCAAGACATCTCTCTTCTCGACGTTCTCTCTCTTCGCCGGAAAGTTGGCATGCTCTTTCAACTCCCTGCCCTCTTTCAAGGCACAGTTGGCGACAATGTGAGGTATGGACCAGGGCTTAGAGGGAAAAAGCTAAGCGATGATGAGGTGCACAAGTTGCTGGAAATGGCAGACTTAGATGCTTCTTTCATGGATAAGTCCGGTGCTGAGCTCTCTGTGGGTCAAGCTCAAAGGGTTGCACTTGCTAGGACTTTGGCTAATTCACCAGAGGTTTTGTTGTTGGATGAGCCTACTAGTGCGTTGGATCCTATATCGACAGAAAACATAGAGGATGCCCTGATGAAGCTGAACAAGAACAGGGGCATGACAGTGATCATGGTGTCTCATAGCATCAAACAGATACAGAGGATTGCTGACATGGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATAAACTCTCCGAGGCCAACCATCCCATGGCACGAAGGTTTCTTGAACTCAGTTCATAG 774 0.4897 MSSLLDDCREHLLEVDANAKLKFQIRNLTRVSHDGVSILKGINLDIPKGVTVGIIGPSGSGKSTLLRALNRLWEPPSASVFLDGQDISLLDVLSLRRKVGMLFQLPALFQGTVGDNVRYGPGLRGKKLSDDEVHKLLEMADLDASFMDKSGAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNRGMTVIMVSHSIKQIQRIADMVCLLVDGEIVEVLKPDKLSEANHPMARRFLELSS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04939 257 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 5 256 IPR005670 GO:0005315|GO:0016020|GO:0035435
Phac2g04939 257 Pfam ABC transporter 39 182 IPR003439 GO:0005524
Phac2g04939 257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 254 IPR003439 GO:0005524
Phac2g04939 257 Gene3D - 19 256 IPR027417 -
Phac2g04939 257 FunFam ABC transporter, ATP-binding protein 20 252 - -
Phac2g04939 257 CDD ABC_PstB_phosphate_transporter 23 241 IPR005670 GO:0005315|GO:0016020|GO:0035435
Phac2g04939 257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 244 IPR027417 -
Phac2g04939 257 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524|GO:0016887
Phac2g04939 257 SMART AAA_5 48 231 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04939 Phac-Chr2 45519453 45521170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04939 36 247 Calmodulin-binding Proteins AT2G36910 32.273 4.36e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04939 K02068 - gmx:100791365 407.142