Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04930 ATGGACGGATTACTCGGCCTTCTGAGAATTCATGTCAGGCGTGGTGTCAACCTCGCCATTCGTGATGTCAGCACAAGCGATCCATACGTCGTCGTTAAGATGGACAAGCAGAAGCTCAAGACCAGTGTGATTAAAAAGGATATTAACCCTGAGTGGAATGAAGATCTTACCTTTTCTGTCACAGATCCCTCTTGTCCATTGATAATGACTGTGTATGATCATGACACATTCAGCATGGATGACAAAATGGGAGATGCAGAATTTGATATCTCACCGTATATAGAAGCTGTGAAGATGGAAGTAGATGATCTTCCGAATGGAACCATAATCACCAGAATGCTACCATGCAGGACAAACTGTCTGGCGGAGGAGAGTTGTGTGGTTTATGAGAATGGTAAAGTTGTACAAAATGTTGTTCTAAGATTACGACACGTGGAATGCGGTGAGCTGGAATTTCAATTGGAATGGATTAGTCTTCCTGGGGCCAAGTCTTTAGCATAG 501 0.4331 MDGLLGLLRIHVRRGVNLAIRDVSTSDPYVVVKMDKQKLKTSVIKKDINPEWNEDLTFSVTDPSCPLIMTVYDHDTFSMDDKMGDAEFDISPYIEAVKMEVDDLPNGTIITRMLPCRTNCLAEESCVVYENGKVVQNVVLRLRHVECGELEFQLEWISLPGAKSLA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04930 166 CDD C2_ArfGAP 5 148 - -
Phac2g04930 166 SMART C2_3c 7 102 IPR000008 -
Phac2g04930 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Phac2g04930 166 PRINTS C2 domain signature 22 34 IPR000008 -
Phac2g04930 166 PRINTS C2 domain signature 67 75 IPR000008 -
Phac2g04930 166 PRINTS C2 domain signature 46 59 IPR000008 -
Phac2g04930 166 Pfam C2 domain 6 92 IPR000008 -
Phac2g04930 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Phac2g04930 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 153 IPR035892 -
Phac2g04930 166 Gene3D C2 domain 5 164 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04930 Phac-Chr2 45493156 45494461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04930 38 166 C2H2 Transcription Factor Family AT1G70790 55.725 2.52e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04930 - - pvu:PHAVU_002G330200g 334.339