Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04923 ATGTGGATGGTAGGTTACAACGAAGGTGGTGAGTTCAGCATGGCTGATTATGCACTCAATGGGAGAAAACTTAGGCCTCTCATGCCAAGGCCAGTCACTTCTCCCAACAACACTCCAAACGCAAACTCTCCATGCTTGAGCCGCATCCATCATGGCAACGACTTTTTTTCACAATATCACAATCTGGCATCAGTGGCGGATCAGGGCAAGAGAGAGTTCAATCCTCCACCGGTAGTGGTGAGTTCAAGGTGGAATCCAACCCCGGAGCAGCTAAGGGCATTGGAGGAATTGTACAGAAGAGGGACAAGAACACCATCTGCTGAGCAAATCCAACAAATCACGGCACAGCTTCGAAGGTTTGGAAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCGAGGGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGCGGCTGAGGATCATCACACCCGTGACTTTGATGGTACTCTTGACAAGAAAGACTTAGGGGCAAGTAGGACAGTGTTTGAAGTGGAACAGACCAAGAACTGGGAATCCTCTACAAACTGCAGTACCCTTGCAAAGGAATCTGTTTCAATACAAAGGGCAGCAGCAAAAGCAGATTGTAGAACAGAAGGATGGCTCCAATTCGATGAAGAAGAGTTACACCACACAAGAAACTTAATGGAGAGGAATGCCACGTGGCACATGATGCAGTTATCTTGTCCTCCCCCTCCTTCAGTTTCACCCCACCTCATAAACACACCTCCTACCATCTCTACTTCTAGCATGGCCACCACACCCTCTGTCACAGCAAGAGTAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTCATTTCACCTAACAGAGAAAACGGTATTATCCACTTAAGCAGTATCGACACCGATGATAATTCTGTGGAATCTCAAACACTTCAACTTTTCCCAATAAGGAACGGGGATGAAAGCAGTGACAACCTTAACCACCACAAAGAGACAGAGGTATCGGTCTCAGCAATGAATGCCCCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAAGTGA 1071 0.4641 MWMVGYNEGGEFSMADYALNGRKLRPLMPRPVTSPNNTPNANSPCLSRIHHGNDFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEDHHTRDFDGTLDKKDLGASRTVFEVEQTKNWESSTNCSTLAKESVSIQRAAAKADCRTEGWLQFDEEELHHTRNLMERNATWHMMQLSCPPPPSVSPHLINTPPTISTSSMATTPSVTARVMDPKLIKTHDLSFFISPNRENGIIHLSSIDTDDNSVESQTLQLFPIRNGDESSDNLNHHKETEVSVSAMNAPSQFFEFLPLKK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04923 356 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 68 350 IPR044555 GO:0003700|GO:0099402
Phac2g04923 356 CDD homeodomain 83 143 IPR001356 GO:0003677
Phac2g04923 356 Gene3D - 80 142 - -
Phac2g04923 356 SMART HOX_1 79 146 IPR001356 GO:0003677
Phac2g04923 356 FunFam WUSCHEL-related homeobox 4 81 148 - -
Phac2g04923 356 MobiDBLite consensus disorder prediction 140 164 - -
Phac2g04923 356 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Phac2g04923 356 MobiDBLite consensus disorder prediction 143 164 - -
Phac2g04923 356 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Phac2g04923 356 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04923 Phac-Chr2 45461911 45464429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04923 1 355 Wox Gene Family AT3G18010 40.933 8.14e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac2g04923 Homeodomain 9.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04923 - - gmx:100777274 640.188