Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04914 ATGGCTTCCAGATTCTGGACCCAGGGTGGAAGTGATTCTGAGGAGGAGGAGAGTGATTATGACGAGGAGGTCGAAACGGCGGTTGGTGATTCTGCCAATCAAGCAGTGACAAGCAGGTACCTGCAGGACAATGCAAGTGACAGCGATGACTCCGATGGCCAGAAACGTGTTGTGAGGTCAGCAAAAGACAAGCGTTTTGAGGAGATGGTTTCCACTGTCGACCAGATGAAGAATGCCATGAAGATCAATGACTGGGTGAGCTTGCTAGAAAATTTTGACAAGATTAACAAACAGCTTGAGAAAGTCATGCGCATCACTGAGTCGGTGAAGGTCCCCAACCTTTACATCAAGGCACTTGTGATCTTGGAGGATTTCTTGGCTCAGGCTTTGGCTAATAAGGATGCCAAGAAGAAAATGAGTAGTAGCAATGCTAAAGCCTTGAACTCAATGAAGCAGAAGCTGAAGAAGAATAACAAGCAGTATGAGGAGTTGATTAATAAGTGCAGGGAGAATCCTGAGAGTGAGGAAGAGAAAGAAGAAGAGGAGAGTGAGGATGATTATGAAAGTGATGATGAGATTATTGAGCCTGAGCAGCTTCGAAAACCAGAAGCCAAATCTGATTCGGAAGGCTCTCAATATGACGATGAAAAGCCAGATGAAGGTCCTTGGGACCAAAAGCTTAGCAAGAAGGACAGACTTTTAGATAGACAGTTCATGAAAAACCCTAGTGAGATCACATGGGACACTGTTAACAAGAAGTTTAAAGAGGTTGTGTCTGCTAGGGGAAGGAAGGGAACTGGGAGGTTTGAGCAGGTTGAGCAGCTCACTTTCCTAACAAAAGTTGCTAAGACACCTGCTCAGAAGCTGGAAATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGTCTGAATGGGTACATGCCCATAAATGTATGGAAAAAATGTGTGCACAACATGCTGATCATTCTTGATATTTTAGTCCAGTACCCAAACATAGTGGTTGATGATTCTGTGGAACCAGATGAAAATGAGACTCAGAAAGGTACCGAACATAATGGACCAATTCGGGTTTGGGGTAACTTAGTTGCTTTCTTAGAAAGAATCGATGTTGAGTTTTTCAAGAGCTTGCAATGTATAGATCCTCATACACGTGACTATGTGGAGAGACTTAGGGATGAACCCCTATTTCTGGTTCTTGCTCAGAATGTCCAGGAATATATTGAAAGAGTTGGAAATTTCAAAGCCGCTTCTAAGGTGGCCTTAAGGAGGGTTGAGCTCATTTACTACAAACCGCAGGAGGTTTATGATGCTATGAGAAAATTGACTGAGTTGACAGAAGCTGGGGAGAATGGAGGGGAGGCAAGTGAGGAGTCAAAAGAATTTGAACCACGAGTTCCAACTGCATTTGTTGTTACCCCAGAGGTTGTGGCACGAAAACCCACTTTCCCTGAGTATAGCAGGACCTTGATGGATGTATTGGTATCTTTGATATACAAATATGGAGATGAGCGAACTAAAGCACGAGCAATGCTCTGTGATATATATCAGCATGCACTTCTTGATGAGTTCTCAATTGCCCGTGATCTGCTGCTTATGAGCCATTTACAAGATAGTGTTCAGCATTTAGACATTTCAACACAGATACTTTTTAACAGGGCTATGTCACAGTTAGGTTTATGTGCTTTTCGGGTTGGACTGATTTCTGAAGCACATGGCTGTCTGTCCGAACTCTACTCTGGTGGAAGGGTGAAGGAGTTGCTGGCACAAGGTGTGTCACAAAGTCGTTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCACATCAATCTTGAGCTCCTGGAGGCCGTACATCTTGTATCTGCTATGCTGCTGGAAGTTCCCAACTTGGCAGCCAATGTTCATGATGCCAAAAGGAAGGTCATTAGTAAAAATTTCCGTCGCTTGCTCGAGGTAAGCGAGAAACAAACATTTACTGGTCCACCGGAAAATGTGAGAGATCATGTTATGGCTGCTACAAGGGTTCTACGCAAGGGAGACTTCCAGAAGGCTTTTGACATTATTGTGTCTCTTGATGTATGGAAATTTGTGAGAAATCGAGACACTGTGCTTGAAATGCTGAAGGACAAAATCAAGGAGGAGGCATTGAGGACGTACCTCTTTACCTTCTCTTCATCTTATGAATCCTTGTGCTTGGATCAGCTCTCAAAAAATTTTGATCTCTCTGTTTCTCGCACTCATAGCATTGTCAGTAGGATGATGATCAATGAGGAACTTTATGCAAGCTGGGACCAGCCATCCAGGTGTATTCTTTTCCAAGATGTTGAACACTCTAGGCTGCAGGCATTGGCATTCCAGTTGACCGAGAAGTTATCTATTCTCGCAGAGAATAATGAAAAAGCAACAGAGGCAAGGATAGGTGGTAGTGGATTAGATCTGCCTCTAAGGCGGAGAGATGGCCAGGACTATGCTGCTGCCGCCGCAGGTGGTGGTGGAACAGCATCTTCAGGTGGTAGATGGCAAGAAATGTCCCTTTCTCAGCCAAGATCAGGCAGTGGGCGTACCGGATATGGTGGTGGTGGTGGAAGACCAATGGCATTAGGCCAAGCAGCAGGGGGTGGCTATTCAAGGGGACGAGGAACAGGTGCTTCATATGGAGGTTCAGGGAGGACTTCTCAAAGGGGTTCAGCATTAAGGGGAGCCCATGGCGATGTATCTACTCGCATGGTTAGCCTCAAGGGAGCAGCTCGGGCTTGA 2793 0.4504 MASRFWTQGGSDSEEEESDYDEEVETAVGDSANQAVTSRYLQDNASDSDDSDGQKRVVRSAKDKRFEEMVSTVDQMKNAMKINDWVSLLENFDKINKQLEKVMRITESVKVPNLYIKALVILEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRENPESEEEKEEEESEDDYESDDEIIEPEQLRKPEAKSDSEGSQYDDEKPDEGPWDQKLSKKDRLLDRQFMKNPSEITWDTVNKKFKEVVSARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGYMPINVWKKCVHNMLIILDILVQYPNIVVDDSVEPDENETQKGTEHNGPIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPLFLVLAQNVQEYIERVGNFKAASKVALRRVELIYYKPQEVYDAMRKLTELTEAGENGGEASEESKEFEPRVPTAFVVTPEVVARKPTFPEYSRTLMDVLVSLIYKYGDERTKARAMLCDIYQHALLDEFSIARDLLLMSHLQDSVQHLDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNLAANVHDAKRKVISKNFRRLLEVSEKQTFTGPPENVRDHVMAATRVLRKGDFQKAFDIIVSLDVWKFVRNRDTVLEMLKDKIKEEALRTYLFTFSSSYESLCLDQLSKNFDLSVSRTHSIVSRMMINEELYASWDQPSRCILFQDVEHSRLQALAFQLTEKLSILAENNEKATEARIGGSGLDLPLRRRDGQDYAAAAAGGGGTASSGGRWQEMSLSQPRSGSGRTGYGGGGGRPMALGQAAGGGYSRGRGTGASYGGSGRTSQRGSALRGAHGDVSTRMVSLKGAARA* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04914 930 Coils Coil 144 171 - -
Phac2g04914 930 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 924 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Phac2g04914 930 MobiDBLite consensus disorder prediction 30 44 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 194 228 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 849 865 - -
Phac2g04914 930 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 868 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Phac2g04914 930 ProSiteProfiles PCI domain profile. 617 789 IPR000717 -
Phac2g04914 930 MobiDBLite consensus disorder prediction 45 60 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 134 228 - -
Phac2g04914 930 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 718 806 IPR000717 -
Phac2g04914 930 MobiDBLite consensus disorder prediction 175 193 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 135 154 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 837 930 - -
Phac2g04914 930 MobiDBLite consensus disorder prediction 155 174 - -
Phac2g04914 930 SUPERFAMILY "Winged helix" DNA-binding domain 713 788 IPR036390 -
Phac2g04914 930 MobiDBLite consensus disorder prediction 12 26 - -
Phac2g04914 930 Pfam PCI domain 657 785 IPR000717 -
Phac2g04914 930 MobiDBLite consensus disorder prediction 1 60 - -
Phac2g04914 930 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 649 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04914 Phac-Chr2 45420687 45425699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04914 1 930 Eukaryotic Initiation Factors Gene Family AT3G56150 68.483 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04914 K03252 - gmx:100781967 1560.04