Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04895 ATGGATATCGAAGAAGACATCCGTTCTTTACAGCTCGAATCAGCAGATGACAATAATGGGGTGGTAAATCCAGAGGATGGAAAGCCGGAAGAAGTTGAGAATTCCGATAAGATGGATGAAGATCCTAAGCAGGAGGTTCAGGCACAGGCTGCTGAGGCTGAGCCAAAAGTGAAAGATAAGGAGATTCCTCCCGTTCAAGAAGAAGAAGAAGAGGAGCCAGAGACGACAAAAAGGCACTTGAATGTGGTGTTCATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAAATACTTTTCCTCAGTGGTCAAGTTGACGAACGGACTATCCAAAAATACGAGAAAGAGGCCAAGGACAAAAGTCGAGAAAGTTGGTACATGGCTTATATAATGGACACAAATGAGGAGGAGAGGGTAAAGGGAAAGACGGTTGAAGTTGGAAGAGCACATTTTGAAACTGAGACAACAAGGTTTACTATTTTGGATGCGCCTGGCCACAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTCATTTCTGCACGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAGACTCGTGAGCATGTCCAGCTTGCGAAAACGCTGGGTGTGTCTAAGTTGCTTGTTGTTGTTAATAAAATGGACGAACCTACAGTGCAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTTCCATTTCTAAAGCAATCTGGATACAATGTAAAGAAAGATGTCTTGTTTTTGCCAATATCTGGCCTAGTGGGTGCAAACATGAAAACAAGGGTGGACAAAAGTGTCTGCCCATGGTGGAATGGGCCTTGCTTGTTCGAGGCCCTTGATGCTATTGAAGTTCCACTAAGGGATCCCAAAGGTCCTTTCAGGATGCCCATTATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTTGAATCCGGTTCTGTTCGCGAGGGAGATTCCATGCTGGTCATGCCGAATAAGGATCACGTAAAAGTTGTTGCCATATTCATTGATGAGGATCGTGTTAAACGTGCTGGACCTGGTGAAAATTTACGGATTAGATTATCTGGTGTTGAAGATGAAGACATTTTAGCTGGGTTTGTCCTGTCTAGTGTTGCTAATCCAATACCAGCAGTTACTGAGTTTGTTGCTCAGTTGGTGATCCTTGAATTGCTAGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCATATCCACTCTGTGGTTGAGGAATGTGAGATTGTTGAACTTATACAGCAAATTGATACAAAGACAAAGAAGCCTTTGAAGAAGAAAATTCTCTTTGTGAAGAATGGTGCTGTTGTAGTGTGCCGTGTTCAGGTTAATAACTCTATTTGCATTGAGAAGTTCTCTGATTTCCCACAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAGACTGTTGCCGTGGGAAAAGTCACTGGTCTGTGA 1512 0.4325 MDIEEDIRSLQLESADDNNGVVNPEDGKPEEVENSDKMDEDPKQEVQAQAAEAEPKVKDKEIPPVQEEEEEEPETTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERYDEIESKMVPFLKQSGYNVKKDVLFLPISGLVGANMKTRVDKSVCPWWNGPCLFEALDAIEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSMLVMPNKDHVKVVAIFIDEDRVKRAGPGENLRIRLSGVEDEDILAGFVLSSVANPIPAVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELIQQIDTKTKKPLKKKILFVKNGAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04895 503 PRINTS GTP-binding elongation factor signature 220 229 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 Pfam Elongation factor Tu GTP binding domain 77 282 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 306 IPR000795 GO:0003924|GO:0005525
Phac2g04895 503 Gene3D Translation factors 306 391 - -
Phac2g04895 503 CDD EF1_alpha 81 301 - -
Phac2g04895 503 CDD eRF3_II 308 389 - -
Phac2g04895 503 Gene3D - 57 301 IPR027417 -
Phac2g04895 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 57 301 - -
Phac2g04895 503 MobiDBLite consensus disorder prediction 1 78 - -
Phac2g04895 503 Pfam Elongation factor Tu C-terminal domain 394 502 IPR004160 -
Phac2g04895 503 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Phac2g04895 503 PANTHER TRANSLATION FACTOR 69 501 - -
Phac2g04895 503 MobiDBLite consensus disorder prediction 23 64 - -
Phac2g04895 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 397 502 IPR009001 -
Phac2g04895 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 305 391 - -
Phac2g04895 503 Pfam Elongation factor Tu domain 2 321 387 IPR004161 GO:0005525
Phac2g04895 503 Gene3D Translation factors 393 503 - -
Phac2g04895 503 FunFam Putative translation elongation/initiation factor family protein 395 503 - -
Phac2g04895 503 SUPERFAMILY Translation proteins 300 393 IPR009000 -
Phac2g04895 503 CDD eRF3_C_III 395 503 - -
Phac2g04895 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04895 Phac-Chr2 45296213 45306729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04895 77 498 Eukaryotic Initiation Factors Gene Family AT5G60390 37.882 2.58e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04895 K03267 - gmx:100793653 932.169