Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04852 ATGGACAATCTTAGGATGCTTGTGCTCCACACGCCTAAATACATGTCAGATGTGTCTCGTAAAGAGTTGGACGATCTTTGGACGTTTTTACTCTACTCAACTGAATACATATCAAATGTGTCTCTTGAATCATCTCTCGTAGGTCTGCCAGACACTCTAAAGTTTCTTTATTGGAGAGATTTCCCGCAAAGATTTTGGCCTCCAAACTTTTGCCCACAAAATCTAGTGATCCTCGAAATGCCAGGCTGCCGTCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAAGTTGAAAAGGCTCAACCTGAGTCATTCTCTGAAACTTACTAGAATACCAGACCTTTCTCTGTCACCCAATATTGAAGAACTAATTCTGAGTTATTGTGAAAAGTTGATTAAAGTTCACTCTTCGATATTCCTCAGCAAGCTCAGTTGTTTATGTTTAGATCATTGTTATCATCTCAATAGTGTAAATATTCCCAACAAGATTTTATCCACATCTCCAGGATTGATCATTCTTTCGCACTGTGAGGAGCTTGAAATGTTTTCAACCAGTCAACCCAGATACCCTCATGTGAAACTGGAGCGTCAACATCCAACTTTCTCAAGTTTACTTTTGGGAGGGACTGTTAAATTCCATAATGCTAAAGGTATTTTCCCAACTTCTAGTGAAATTTCCTCAATTAGTTTTGACAGATATAACGAAGAAGAAGTGGGTAATAATACTATATACTCACAATGTCAAGTGTCGACAATACTCGAAGGTGTACCCTCAAACTTTCAAAATCTCAAGAGGCTCTGTCACTTAGATCTCTCTCACTGTTCTTCCCTTACAATCTTTCCATTTGACCTTTCTGATATGAAGTTCCTAAAGCAACTTTGTCTCCGTGGTTGCTCAAAATTGAAAAATTTACCCCAGATTCAGGACACGTTGGAAGATCTAGTGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAAGAACTGAGTTTGTGCAGTTGCTTCAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTAGACCTTACCCGCTGTAGTTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAATCTTGATTTGTGTGGTTGCTCAAGCCTGAGGACCTTCCCAGATATCACGGAGCCGTCTCATACTTTTGCTCACATTAAGTTAACATGTACGGCTATTAAAGAACTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGGAGCTCCGCAAATGCACTGATCTCGAGTCACTTCCAAACTCCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAACACACATTGGTCGTTTGACGTCATTAATGGAACTGTCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTAAAAAAACTAGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGTCCAATTCTCTTGTTCGAAACTTGTCAAATTCCAAAGAGGGTGTCTTCAAATTTCTTTTGACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATAGAGGAGGATGCAAGGCTTAGGATGACCGACGATACGTATAGGTGTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTTTTAAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATACGAAAGTTGTTAAAGGTAGATATGGTTCCTTTGGTTACAGCCTAAAATTTGAATCTGATGATGATGGCACACGGATCATTCCAAATAATGATGTGTTAAACAAGTATTTCAGATGGGATGATGAAGAGAGAGGCGTTGATAAAGATCACACATTCGTGTGGAAATTTAACTTGGAGTCCCTAAGGGCAAGCGGCATGAGCCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTTGGCATGATCCCTTTCTGCGGTCAAATCGCAAATTACTTGTGAGAGAGTTGAAATCAGGTATAACAATAAAAGAATGCGGCATATGCCCTCTTTATACGAAAAAGAAAGATGATAAATATGGTGGTGCTGTTGACATTGAAGAATCCAGTGGAAGCAATGTTTCACAGTCTTTAAGAGAAACAATGGAAGATAGGAAGGGGAAGGCCGAAAGCTGCATTATCAACTAG 2385 0.4084 MDNLRMLVLHTPKYMSDVSRKELDDLWTFLLYSTEYISNVSLESSLVGLPDTLKFLYWRDFPQRFWPPNFCPQNLVILEMPGCRLEQLWEGDQNLPKLKRLNLSHSLKLTRIPDLSLSPNIEELILSYCEKLIKVHSSIFLSKLSCLCLDHCYHLNSVNIPNKILSTSPGLIILSHCEELEMFSTSQPRYPHVKLERQHPTFSSLLLGGTVKFHNAKGIFPTSSEISSISFDRYNEEEVGNNTIYSQCQVSTILEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSDMKFLKQLCLRGCSKLKNLPQIQDTLEDLVVLILDDTAIQALPSSLCRLVGLQELSLCSCFNLEIIPSSIGSLTRLCKLDLTRCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPDITEPSHTFAHIKLTCTAIKELPSSFGNLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCAKLTEIPTHIGRLTSLMELSLRDSGIVNLPESIAHLSSLKSLDLSDCKKLECIPQIPPFLKKLVALDCPSIRRVMSNSLVRNLSNSKEGVFKFLLTNAQQLDSGGRANIEEDARLRMTDDTYRCVFFCFPGSAVPGWFHFRGKGHSVTINEDLSFLSDDRLTGFALCVVFGVLDTKVVKGRYGSFGYSLKFESDDDGTRIIPNNDVLNKYFRWDDEERGVDKDHTFVWKFNLESLRASGMSLRLCDARSFTFEISWHDPFLRSNRKLLVRELKSGITIKECGICPLYTKKKDDKYGGAVDIEESSGSNVSQSLRETMEDRKGKAESCIIN* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04852 794 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 384 483 - -
Phac2g04852 794 MobiDBLite consensus disorder prediction 770 794 - -
Phac2g04852 794 Pfam C-JID domain 593 754 IPR045344 -
Phac2g04852 794 SUPERFAMILY L domain-like 41 527 - -
Phac2g04852 794 Gene3D Ribonuclease Inhibitor 408 567 IPR032675 -
Phac2g04852 794 MobiDBLite consensus disorder prediction 778 794 - -
Phac2g04852 794 Gene3D Ribonuclease Inhibitor 3 199 IPR032675 -
Phac2g04852 794 Gene3D Ribonuclease Inhibitor 246 407 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04852 Phac-Chr2 45007665 45010274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04852 332 513 WRKY Transcription Factor Family AT4G12020 36.264 6.25e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04852 - - pvu:PHAVU_002G323800g 1201.04