Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04848 ATGTTTTCAACCAGTAAACCCAGATTCCCTCATGTGAAACTGGAGCGTCAACGTCAAACTTTCTCAAGATCCCCACATCAGAAATTGGGGCGTCAACGTGGAAATTTCTCAAGATTCCCTCATCGGGAACACGTTATGATGTCCGAATACGAAGAAAGTAGTGCATGCCGTGTTCATATTTTCCCAACTTCCAGTGAAATTTTCTCAATTACTTTTGACAGATATAATGAAGAAGAAGTGCCTAATAATACTTTAGACTTAGAAGTGTGGAGAGAACTCATGGAAGGTGTGCCCTTGAACTTTCAAAGTCTCAAGAACCTCTGTCACTTAGATCTCTCTGACTGTTCTTCCCTTACAATCTTTCCATTTGACCTTTCTGATATGAAGTTCCTAAAGCAACTTTGTCTCCGTGGTTGCTCAAAATTGGAAAATTTACCCGAGATTGAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTGGGTAGGGCTTGAAGAACTGAGTTTGCGCCATTGCTTCAATCTCGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATCCAAGTTAGACCTTACCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAATTGAGGAAGCTTAAATTGGGTGGTTGCTCAAGGCTGAGGTCCTTCCCAGAGATCACGGAGCCGGCTCATACTTTTGCTCACATTAACTTAAGATCTACGGCTGTTAAAGAACTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGAAGCTCCAGAAATGCACTGATCTCGAGTCACTTCCAAACTCCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCAGGGTGTGCCAAATTAACAGAAATACCAAGACACATTGGTCGTTTGACGTCATTAATGGAACTGTCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATGGCTCATCTTTCAAGCTTGAAATCGCTCGATTTAAGTGACTGCAAAAAGCTTGAATGCATCCCACCGATTCCACCATTTCTAAAACAACTAGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGTCAAATTCTCTTGTTAGAAACTTCTCAAATTCCAAAGAGGATGTATTCAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGCTCGTGCTAACATGGAGGAGGATGCAGGGCTTAGGATGACCGACGATAGATATAGGTCTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTCGTTGGTTCCATTTTCGTGGCAAGGGATGTTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATACGAATGCTGTTAAAGGTAGATATGGTTCTTTTAGTTACAGCCTAAAATTTGAATCTGTTGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACAGCTATTTTGAATGGGATGATGAAGACAGAATTCTTGATAAAGATCACACATTCCTGTGGAAATTTAACTTGGAATCCCTAAGGGCAAGCGGCATGAGCCTTAGGCTATGTGATGCTCGCAGCTTCACTTTTGAGATAAGTCGGTGTGATTATGACTTTGGGTGGCCAGATTACGAATCAGTTGTGGGAGAGTTGAAATCAGTTATCACAATAAAAGAATGCGGCATATGTCCTCTTTATACCAAAAAGAAAGATGATAAATATGGTGCTGTTGACTATTCTGCATCAGAAAATGACATTGAAGAATCCAGTGGAAGCAATGTTGCACAATCTTTAGGAGAAACAAGGGAAGATAGGAAGAGGAAGGCCGAAAGCTACCTAAATTTACCCAAGTTGAAAAGGCTCGACCTGAGTGGTTCTCTGAAACTTACTAGAATACCAGACCTTTCTGTGTCACCAAATATTGAAGAAATAATTCTGAGTTCTTGTGGAAAGTTGATTCAAGTTCACTCTTCGATATTCCTCAACAAGCTAAGTTATTTATGTTTAGATGATTGTTATAATCTCAATAGTGTAAATATTCCCTGCAAGATTTTATCCACATCACCAGGATGGATTACTCTTTCCTGTTGTCGGAAGCTTAATATGTTTTCAACCAGTGAACCCAGATTCCCACATCAAACTTTCTCAAGATCCCCACATCAGAAACTGGGGCATCAACGTGGAAATTTCTCAAGATTCCCTCGTCATGGTGCAGGACGGTGTGGCACATTTCAAAACCATAGTCCTTATTATTCCCCAACTTCCAGTGAAATTTGCTCAATTATTTTTGACAGATATAATATAGAAGAAGTGGGTAATAATACTAAATACTTAGAAGAGTTGACAAAACTCACGGAAGGTGTGCCCTTAAACTTTTCTCTCAAGAAGCTCTGTCACTTAAATCTCTCTGACTGCTCTTCCCTTACAATCATTCCATTTGACCTTTCTGATATGAAATTCCTAAAGAAACTTTCTCTCCGTGGTTGCTCAAAATTGGAAAATTTACCCGAGATTGAGGACACGTTGGAAGATCTAAAGGAGCTCATCTTAGATGACACAGCTATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTGAAGAACTGAGTTTGCACAGTTGCTTCAATCTTGAGATTATTCCATCATCCATTGGAAGCCTCACCGGACTATGCGAATTAGACCTTACCCACTGTAATTCACTTCAAACATTTCCAAGCACCGTTTTCAATTTGAAGTTGAGCAAGCTTGATTTGTGTGGTTGCTCAAGCCTGAGGACCTTCCCAGAGATCACAGAGCCGGCTCCTACTTTTGATCACATTAACTTAACATCTACGGCTGTTAAAGAACTGCCTTCCTCCTTTGGCAATTTGGTTAATCTTCGATCCCTGGAGCTCCAAGAGTGCATTGATCTCGAGTCACTTCCAAACTCCATTGTAAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGCCCCAAATTAACAGAAATCCCAAGACACATTGGTAGCTTGACGTCATTAATAGAACTGTCATTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAAATCTCTTGATTTAAGCAACTGCAAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTAAAACAACTCGTGGCATTGAATTGCCCATCCATTAGAAGAGTGATGTCCAATTCTCTTGTTCGAAACTTCTCAAATTCCAAAGAGGGTGTCTTCAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAAAATTGAGGAGGATGCAAGGCTTAGGATGACCGACGATACATATAGGTCTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATATTAAAGGTGGATATGGTTCTTTTGGTTACAGCCTAAAATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACAGCTATTTCGAATGGGGTGAAGGCAGAGGTCTTGATCAAGATCACACATTCGTTTGGAAATTTAACATGGAGTCCCTATGGGCGAAGGGCATGAGCCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATAAGTCCGCGTGATTATGTCTTTGGCATCACAATAAAAGAATGCGGCATAGGCCCTCTTTATTCCAAAAAGAAAGATGATGAATATGGTGGTGCTGTTGACATTGAAGATTCCAGTGGAAGCAATGTTGCACAGTCTTCAAGAGACACAAGAAGGGAAGATAGGAAGAGAAAGGCCGAAAGCTACCAAGTCAACTAG 4005 0.4122 MFSTSKPRFPHVKLERQRQTFSRSPHQKLGRQRGNFSRFPHREHVMMSEYEESSACRVHIFPTSSEIFSITFDRYNEEEVPNNTLDLEVWRELMEGVPLNFQSLKNLCHLDLSDCSSLTIFPFDLSDMKFLKQLCLRGCSKLENLPEIEDTLEDLAVLILDDTAIQALPSSLCRWVGLEELSLRHCFNLEIIPSSIGSLTRLSKLDLTHCNSLQTFPSTIFNLKLRKLKLGGCSRLRSFPEITEPAHTFAHINLRSTAVKELPSSFGNLVNLRSLKLQKCTDLESLPNSIVNLKLLSKLDCSGCAKLTEIPRHIGRLTSLMELSLRDSGIVNLPESMAHLSSLKSLDLSDCKKLECIPPIPPFLKQLVALDCPSIRRVMSNSLVRNFSNSKEDVFKFHFTNAQQLDSGARANMEEDAGLRMTDDRYRSVFFCFPGSAVPRWFHFRGKGCSVTINEDLSFCSDDRLTGFALCVVFGVLDTNAVKGRYGSFSYSLKFESVDDGTQIIPNNDVLNSYFEWDDEDRILDKDHTFLWKFNLESLRASGMSLRLCDARSFTFEISRCDYDFGWPDYESVVGELKSVITIKECGICPLYTKKKDDKYGAVDYSASENDIEESSGSNVAQSLGETREDRKRKAESYLNLPKLKRLDLSGSLKLTRIPDLSVSPNIEEIILSSCGKLIQVHSSIFLNKLSYLCLDDCYNLNSVNIPCKILSTSPGWITLSCCRKLNMFSTSEPRFPHQTFSRSPHQKLGHQRGNFSRFPRHGAGRCGTFQNHSPYYSPTSSEICSIIFDRYNIEEVGNNTKYLEELTKLTEGVPLNFSLKKLCHLNLSDCSSLTIIPFDLSDMKFLKKLSLRGCSKLENLPEIEDTLEDLKELILDDTAIQALPSSLCRLVGLEELSLHSCFNLEIIPSSIGSLTGLCELDLTHCNSLQTFPSTVFNLKLSKLDLCGCSSLRTFPEITEPAPTFDHINLTSTAVKELPSSFGNLVNLRSLELQECIDLESLPNSIVNLKLLSKLDCSGCPKLTEIPRHIGSLTSLIELSLRDSGIVNLPESIAHLSSLKSLDLSNCKKLECIPQIPPFLKQLVALNCPSIRRVMSNSLVRNFSNSKEGVFKFHFTNAQQLDSGGRAKIEEDARLRMTDDTYRSVFFCFPGSAVPGWFHFRGKGHSVTINEDLSFCSDDRLTGFALCVVFGVLDIKGGYGSFGYSLKFESDDDGTQIIPNNDVLNSYFEWGEGRGLDQDHTFVWKFNMESLWAKGMSLRLCDARSFTFEISPRDYVFGITIKECGIGPLYSKKKDDEYGGAVDIEDSSGSNVAQSSRDTRREDRKRKAESYQVN* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04848 1334 MobiDBLite consensus disorder prediction 1301 1334 - -
Phac2g04848 1334 SUPERFAMILY L domain-like 87 712 - -
Phac2g04848 1334 SMART LRR_typ_2 1033 1056 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 641 665 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 317 340 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 915 939 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 199 223 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 868 891 IPR003591 -
Phac2g04848 1334 SMART LRR_typ_2 152 175 IPR003591 -
Phac2g04848 1334 SUPERFAMILY L domain-like 808 1091 - -
Phac2g04848 1334 Pfam C-JID domain 1149 1292 IPR045344 -
Phac2g04848 1334 Pfam C-JID domain 433 595 IPR045344 -
Phac2g04848 1334 Gene3D Ribonuclease Inhibitor 777 1125 IPR032675 -
Phac2g04848 1334 MobiDBLite consensus disorder prediction 1 34 - -
Phac2g04848 1334 MobiDBLite consensus disorder prediction 1316 1334 - -
Phac2g04848 1334 Gene3D Ribonuclease Inhibitor 611 748 IPR032675 -
Phac2g04848 1334 Gene3D Ribonuclease Inhibitor 64 396 IPR032675 -
Phac2g04848 1334 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 941 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04848 Phac-Chr2 44972204 44994308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04848 812 991 WRKY Transcription Factor Family AT4G12020 31.111 1.24e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04848 - - pvu:PHAVU_002G323000g 1105.89