Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04844 ATGGTGAAATCGAACGAAAACGGTTCCGCTGCTTCGGTTCCTCCGTTCTTGAAAAAATGTTACGATATGGTGGAAGACCGGAGCACGGACTCCGTTATCCGTTGGAGCGACGCCGGTGACAGTTTCGTCATCTCCAACACCACTCAATTCTCCGTCACGCTACTTCCTACCTATTTCAAACACAACAATTTCTCCAGTTTTATTAGACAACTCAATATTTATGGTTTCAGGAAAATTGATACAGATTGCTGGGAATTTGCCAATGAAAACTTTGTTAGGAATCAGAAGCAATTGTTGAAGAATATACGCAGAAGGAAACATCCACACATTGCAGATCAACAAAAAGCATTGCCTCTAAATGACAATTGTGATGAACCACCGCAAGAGGCACCAGATCATGGCTTTTGGAAAGAAGTTGAGAATCTCAAATCTGATAAAAATTCGCTTACCCAGGAGTTGGTCAAACTCAGGCAACACCAGGAATCTGCTGAGAACAATTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAACAGATGTTATCATTCTTAGTCATGGTGGTGCAAAGCCCTGGGTTCCTGGTTCAATTGCTTCATCCCAAGGAAAATAATTGGCGTTTGTCTGAATCATGGAATATATTAGATCAAGATAAACAAGATGACAAGCCAATTGCTTCTGATGGGATGATAATAAAGTATAAGCCTCCTGTAAGTGAAAAACTCAAGCCTGTAGTTCCTCTATCTCCTGCTTTCGAAAAAGAACCTGAGCTCTCTGCAGATGTGCTAAAAGACTTGTGCATTAGTCCTGACTTCATGAAAGTGCTTCTGGATGAAAAACTGTGTCCATTAGAAAGTCATTCTCCATTTCTCCTACCAGATTTACCTGATGACGGTTCATGGGAACAGCTTTTTCTAGGCAGTTCTTTCCTGGGAAACATTGAAGATTCTAGTAAAGAAAATGAGGGGCACACGGATAGTGGAATGGAAATTGAACCGACAATATCAAATACTCCTGATGAAGATTCTCGAGCTTTTGAATCGATGATTGTAGAGATGGAGAGAACTCGAGAATGA 1086 0.4134 MVKSNENGSAASVPPFLKKCYDMVEDRSTDSVIRWSDAGDSFVISNTTQFSVTLLPTYFKHNNFSSFIRQLNIYGFRKIDTDCWEFANENFVRNQKQLLKNIRRRKHPHIADQQKALPLNDNCDEPPQEAPDHGFWKEVENLKSDKNSLTQELVKLRQHQESAENNLLLLSDRLQGMEKHQQQMLSFLVMVVQSPGFLVQLLHPKENNWRLSESWNILDQDKQDDKPIASDGMIIKYKPPVSEKLKPVVPLSPAFEKEPELSADVLKDLCISPDFMKVLLDEKLCPLESHSPFLLPDLPDDGSWEQLFLGSSFLGNIEDSSKENEGHTDSGMEIEPTISNTPDEDSRAFESMIVEMERTRE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04844 361 MobiDBLite consensus disorder prediction 318 345 - -
Phac2g04844 361 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 FunFam Heat stress transcription factor B-4 8 106 - -
Phac2g04844 361 Gene3D - 8 106 IPR036388 -
Phac2g04844 361 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 220 IPR027725 -
Phac2g04844 361 Coils Coil 139 166 - -
Phac2g04844 361 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac2g04844 361 SUPERFAMILY "Winged helix" DNA-binding domain 11 105 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04844 Phac-Chr2 44941409 44944772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04844 13 311 HSF AT1G67970 48.344 1.09e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac2g04844 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04844 K09419 - gmx:100813694 650.588