Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04838 ATGGCGGAAAATTCTTCTCCTGCAATCGACACTCACCACAGACTTCCATTCTCATCAATGCTTAATGTTCTTGTCATTGACACTAACCTCAGTGTTCTGGAATACATCAAGCAAGCATGCACCCACTCTTTCTATCAAGTTATACCATGTTCTGAATCTCTGACTGCTGCCAATTTTTTGCGGGAAAAAAAGGAGCTCATTCATCTCATACTCATTGAGGCTCACATGCCATTGATGGATGGCTATGAATTCCTGCAATTCGTCAAAGAAGAACAAATCAATGTTCCTCTCATCATGATGTCCACCGATGATAGTAAGACTTCCATATTGAAGGCCCTTGAAGTTGGAGCTTGTGATTATTGGATCAAACCCTTGGAAAAGAATCGGATCGTGAGTATGTGGATACATGTTGTGAAGAACAGCATGAGTAAAGATAAGAAGCGAAAAGATATTGGTAGCCAGAAAGATGATGACAGAACAAGAGTGATAAGTGATAATTCTGAATTTGCTTCATCTGTAGTTGATTTTGATGTTGATAAATCAAATAATGCTAATCCACCCTCAAGAAAAAAGAAGCGCGTAGTATGGTCAACAGAACTGCATGATTTGTTTCTCAATGCCATGAAGAAATGTGGAGGGGAAGATGCCGTGCCCAAGAAAATTCTTGAAGCTATGAACGTTCCAGGTTTGGAAAGAGGACACGTTGCAAGTCATCTGCAGAAACACAGAAAATATTTGAGAAAGAAGCAACAGAAGGAGATGTCGTTGGCTTCAGGGAATACAGAACCCGAAAGAATCCACCTGCAATCTTCTACTTCACTCACAGATTTTCATCATCCTGGTTTCACAGGCAACATGGGACCAAAAGGAGAGCAACATTTTCATGCAGAAGAAGCTTTGGCACATCCTCCTCCTCCTTTAGCAACTTTTTCTAACATGGCCATTGCTGAGAATTCTTCGCTTTTTTTTTCCCAGAATTACAACTCTGACATCAACCTGAATAATGGGTTAACATCACTTCAATCAATTCAAGGTGGAAACAGCATGGGTGAAGTGATTCTGAATCAAGATTCTGTTTATTACCCACAAAGTCACTCTCCCCAGATATTGAAGATGTAA 1119 0.4021 MAENSSPAIDTHHRLPFSSMLNVLVIDTNLSVLEYIKQACTHSFYQVIPCSESLTAANFLREKKELIHLILIEAHMPLMDGYEFLQFVKEEQINVPLIMMSTDDSKTSILKALEVGACDYWIKPLEKNRIVSMWIHVVKNSMSKDKKRKDIGSQKDDDRTRVISDNSEFASSVVDFDVDKSNNANPPSRKKKRVVWSTELHDLFLNAMKKCGGEDAVPKKILEAMNVPGLERGHVASHLQKHRKYLRKKQQKEMSLASGNTEPERIHLQSSTSLTDFHHPGFTGNMGPKGEQHFHAEEALAHPPPPLATFSNMAIAENSSLFFSQNYNSDINLNNGLTSLQSIQGGNSMGEVILNQDSVYYPQSHSPQILKM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04838 372 ProSiteProfiles Response regulatory domain profile. 22 138 IPR001789 GO:0000160
Phac2g04838 372 SUPERFAMILY CheY-like 19 146 IPR011006 -
Phac2g04838 372 Pfam Response regulator receiver domain 23 132 IPR001789 GO:0000160
Phac2g04838 372 SMART REC_2 21 134 IPR001789 GO:0000160
Phac2g04838 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 247 IPR017930 -
Phac2g04838 372 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Phac2g04838 372 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 273 IPR045279 GO:0009736
Phac2g04838 372 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Phac2g04838 372 Gene3D - 188 249 - -
Phac2g04838 372 FunFam Two-component response regulator 187 250 - -
Phac2g04838 372 MobiDBLite consensus disorder prediction 270 290 - -
Phac2g04838 372 CDD REC_typeB_ARR-like 23 138 - -
Phac2g04838 372 Gene3D - 19 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04838 Phac-Chr2 44912771 44914307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04838 17 306 Response Regulator Gene Family AT2G25180 30.263 1.22e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac2g04838 Response_reg 4.1e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04838 - - pvu:PHAVU_002G322000g 577.4