Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04792 ATGGAAAACCTCTTTTTCAACTGTTTCATTGGATACTGTCTTCTTTATTCTCTCTTGCTTGTGCATGGCAAACAATTGTCATGCAATGAAACACCCTACCCCCGTCTCTGCAAACATTACGTTGACACTACCATGGATGCTTCATCCTCTTCCTTCCATGACATGAACCTTAAGGTCACCATGAACCAAGCCATGGAGGTTTATAAACTTGTCTCAAACATGGACTTGAATAATTTCAAAGACAAAAGATCCAAGTCCGCTTGGGAAGATTGTTTGGAGCTGTACGAGGACACACTTTATCAGCTCAAACGCTCACTGAACTCCAACAATCTAAATGACAGGTTGACATGGCAAAGTGCTTCCATTGCCAATCATCAAACATGCCAAAATGGTTTCACTGAGTTCAACCTTCCCTCTCACCTAAACTACTTCCCCTCCATGTTAACCAACTTCTCCAAACTGCTTAGCAATTCCTTGTCCCTTAGCAAGGCTATGAGTTTGGCATCACTGTCTTCGACTAAACAAAATGGTGGGCGAAGGTTGCTTTCCGATGGCTTCCCCTCTTGGATGTCACATTCAGACAGAAAGCTTCTTCAGGAAACAGCATCAAAAGCTGATGTTGTGGTGGCGCAGGATGGGAGTGGGAACTATAAGACCATCTCAGAGGGAGTGGCTGCAGCTGCTAAGCTCAGTGGGAAAGGGCGTGTTGTGGTGCACGTCAAAGCTGGTGTTTACAAAGAGAGTATCGATATCAAGAGGACTGTGAAGAACTTGATGATCATCGGAGATGGGATGGGTGCTACTATTGTTACTGGTAGTAATAACGCTCAAGATGGTTCCACCACCTTTCGCTCTGCTACTTTTGCGGTTTCTGGAGATAACTTCATTGCTCGGGACATTACCTTCGAGAACACCGCCGGACCGCAGAAGCACCAAGCGGTGGCTCTCCGTTCCGGCGCCGACCACTCGGTGTTTTACCGGTGCAGCTTTAAGGGGTACCAAGACACCTTATACGTCTACGCCAACCGGCAATTCTACCGTGACTGTGACATATACGGAACCGTAGACTTCATTTTCGGGGACGCCGTGTCGGTGTTTCAAAACTGCAACATGTACGTGAGGAAACCGATGAGCAACCAGCAGAACTCGGTGACAGCACAAGGAAGAACCGACCCTAACGAGAACACGGGCATCATCATCCATAACTGTGTTATCACTGCAGCTGGGGACCTGAAAGCGGTGCAGGGCTCTTTCAGAACCTATCTTGGTCGTCCATGGCAGAAGTACTCAAGGACTGTGGTTATGAAGAGTGCCCTTGATGGCTTGATTAACCCTGCAGGTTGGTCTCAGTGGAGTGGAAACTTTGCTCTGAGCACTCTGTATTACGGTGAATATGCGAACACAGGAGCAGGAGCCAGCACCGGAGGGAGGGTGAAATGGGGAGGTTTTCGTGTGATGTCGAGTTCTGAGGCGGTGAAGTTCACCGTGGGAGAATTCTTGGCCGGTGGGTCGTGGATTCCGGGGAGTGGCGTGCCCTTCGATGCAGGTTTATGA 1554 0.4858 MENLFFNCFIGYCLLYSLLLVHGKQLSCNETPYPRLCKHYVDTTMDASSSSFHDMNLKVTMNQAMEVYKLVSNMDLNNFKDKRSKSAWEDCLELYEDTLYQLKRSLNSNNLNDRLTWQSASIANHQTCQNGFTEFNLPSHLNYFPSMLTNFSKLLSNSLSLSKAMSLASLSSTKQNGGRRLLSDGFPSWMSHSDRKLLQETASKADVVVAQDGSGNYKTISEGVAAAAKLSGKGRVVVHVKAGVYKESIDIKRTVKNLMIIGDGMGATIVTGSNNAQDGSTTFRSATFAVSGDNFIARDITFENTAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVYANRQFYRDCDIYGTVDFIFGDAVSVFQNCNMYVRKPMSNQQNSVTAQGRTDPNENTGIIIHNCVITAAGDLKAVQGSFRTYLGRPWQKYSRTVVMKSALDGLINPAGWSQWSGNFALSTLYYGEYANTGAGASTGGRVKWGGFRVMSSSEAVKFTVGEFLAGGSWIPGSGVPFDAGL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04792 517 CDD PMEI-like_3 26 138 - -
Phac2g04792 517 SMART PMEI_2 16 161 IPR006501 GO:0004857
Phac2g04792 517 PANTHER PECTINESTERASE 19 507 - -
Phac2g04792 517 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Phac2g04792 517 Gene3D - 200 517 IPR012334 -
Phac2g04792 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 165 IPR035513 -
Phac2g04792 517 SMART complete 240 420 IPR006633 -
Phac2g04792 517 FunFam Pectinesterase 25 165 - -
Phac2g04792 517 Pfam Pectinesterase 206 502 IPR000070 GO:0030599|GO:0042545
Phac2g04792 517 FunFam Pectinesterase 200 517 - -
Phac2g04792 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 166 IPR035513 -
Phac2g04792 517 Pfam Plant invertase/pectin methylesterase inhibitor 27 161 IPR006501 GO:0004857
Phac2g04792 517 NCBIfam pectinesterase inhibitor domain 27 165 IPR006501 GO:0004857
Phac2g04792 517 SUPERFAMILY Pectin lyase-like 201 516 IPR011050 -
Phac2g04792 517 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04792 Phac-Chr2 44623769 44627926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04792 2 517 Carbohydrate Esterase AT1G23200 50.271 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04792 - - gmx:100775898 905.975