Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04790 ATGCCAGGCCTCACCATTCAGATCACTCAAACCTTTCCATACAGCCATCCAACTATGACCACCTCTTCCTCCTTCCTTGCCTCCATACTCGCCCTTGCTTTCTTCTTAGCAACTTTGCCACAATCCTACTCTCAACAAAACAACACCTACTCCACTTGCAGCCAATCTTTCAGCTGTGGAACTCTCAAAAACATATCCTACCCTTTCTGGGGAGGGAACCGACCCCAGTTTTGTGGCCGGAATGGCTTCAAGCTCACGTGCATGCATGACCAAAACACTTCGCTTCAAGTTGGTTCCCAAAACTTCCATGTACTACACATCAACCAAACGGCTTCCACCATGAGAATGGTGCGAACAGACCTTGTCTATGATAGCTGCTCTTCCAATTTCACCAACACTTCACTCAGTTCCAGTCCCTTTTCTTTTCTCCCCACCGTTCAGAATGTCGCTGTATTCTACGAATGCCCCTCTCAGAATTCTGTGGGTGGAAACACTTTTACGTGTCGGAATGATACTAATAAACACGCTTTCTATGCGGTCAATGAAACTCAGCTGAAGCAGCTTCAGAACTGCGGGGTTAGCGTTGTGGTGCAAGTTTCACAGGGTGTTGTTTGGGATTCTGAGAACGGAATTGAGGCGCTGAAGAAAGCGTTGGATCAAGGATTTGATGTGAAGTTTGATGCAGAGTTGAGTTCTCAGTGCACAGCATGCAGGGATTCTGGAGGAGCATGTGGAACGAATGAGAAGAATTCCGATCAGTTTTCATGTTATTGCTCGGATGAAACTCGTGGTTCAGTGTGCTCTACTCACAAAAGTGGCAGGAATAGCAGAGTGTTGAAGCTGGTTTTAGGTTTCGTTGGTACTGGATTTGCACTACCTCTAATCGCTGTCATCATATGCCGCAACAAAGCTAGAATTTGGAAATTTATATTAATACAATTGGGCAAGATAAAGAAGAATGATCGAGTTATAGAAGCCTTCATTGAAAGCCAAGGTTCTATGGGTATAAAGAGATACAGTTTCTCTGAGATCAAGAAAATGACCAACTCCTTCAAAATTAAACTGGGGGAAGGTGGTTATGGATCTGTATACAAAGGAAAGTTACTCAGTGGTGGCTCGGTGGCAGTGAAAATACTGAACGAGTCAAAGGAGAATGGCGATGAGTTTATCAATGAGGTTGCTAGCATAAGCAAAACATCCCATGTTAACATTGTCTCTCTCCTTGGATTTTGCCTAGAAGGAAGCAGAAAAGCCCTGGTCTATGAGTTTATGTCTAATGGTTCACTCGAGAAGTACATTCACAAGAAAGCAGCAGAAGAAAATAAAACTACTACTCCACCACCCTTGGGTTGGGACAGATTGAACCAGATTGCAATAGGCATAGCTCGAGGACTAGAGTATTTGCACAAAGGATGCAACACTCGGATTCTGCATTTTGACATTAAGCCACATAACATTCTTTTGGACGAAACCTATCGCCCAAAGATATCAGATTTTGGACTTGCTAAGCTGAGCACAAGAGATGAAAGCATTGTATCAATGTCAAATGCTAGAGGGACAATAGGGTATGTGGCTCCTGAAGTGTTCAACAAAAGTTTTGGAGGTGTTTCACACAAGTCTGATGTTTACAGCTATGGAATGATGCTACTAGAAATGGTTGGAGGACAGAAGAACATCAACGTTGAAGCTAGTCGCTCAAGCGAACTATATTTCCCACACTTGGTTATTTATAAGAAGCTTGAGCAGGGAAATGATTTGGGACTTGATGGGATATTGTCTGGTGAGGAAAATGAGATAGCAAAGAGAATGACTATGGTGGCTCTGTGGTGCATTCAGACAATTCCTTCTCACAGACCTACCATAAGTACAGTGATTGACATGTTGTTAGGTAGTGCGGATTCTTTGGAAATGCCACCAAAACCTTTCCTCTCTTCTCCTCCAAGACCAACAGCTTTTTCCTCTGCAATGTCCGAATCATTTGATAGTGTCTCATGCAGCTTATAG 2004 0.4336 MPGLTIQITQTFPYSHPTMTTSSSFLASILALAFFLATLPQSYSQQNNTYSTCSQSFSCGTLKNISYPFWGGNRPQFCGRNGFKLTCMHDQNTSLQVGSQNFHVLHINQTASTMRMVRTDLVYDSCSSNFTNTSLSSSPFSFLPTVQNVAVFYECPSQNSVGGNTFTCRNDTNKHAFYAVNETQLKQLQNCGVSVVVQVSQGVVWDSENGIEALKKALDQGFDVKFDAELSSQCTACRDSGGACGTNEKNSDQFSCYCSDETRGSVCSTHKSGRNSRVLKLVLGFVGTGFALPLIAVIICRNKARIWKFILIQLGKIKKNDRVIEAFIESQGSMGIKRYSFSEIKKMTNSFKIKLGEGGYGSVYKGKLLSGGSVAVKILNESKENGDEFINEVASISKTSHVNIVSLLGFCLEGSRKALVYEFMSNGSLEKYIHKKAAEENKTTTPPPLGWDRLNQIAIGIARGLEYLHKGCNTRILHFDIKPHNILLDETYRPKISDFGLAKLSTRDESIVSMSNARGTIGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGQKNINVEASRSSELYFPHLVIYKKLEQGNDLGLDGILSGEENEIAKRMTMVALWCIQTIPSHRPTISTVIDMLLGSADSLEMPPKPFLSSPPRPTAFSSAMSESFDSVSCSL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04790 667 Pfam Wall-associated receptor kinase galacturonan-binding 53 118 IPR025287 GO:0030247
Phac2g04790 667 Pfam Protein kinase domain 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04790 667 Gene3D Phosphorylase Kinase; domain 1 315 423 - -
Phac2g04790 667 FunFam serine/threonine-protein kinase PBS1-like 318 423 - -
Phac2g04790 667 PANTHER RUST RESISTANCE KINASE LR10-RELATED 321 648 IPR045874 GO:0004672
Phac2g04790 667 SMART serkin_6 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04790 667 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Phac2g04790 667 FunFam PR5-like receptor kinase 424 640 - -
Phac2g04790 667 SUPERFAMILY Protein kinase-like (PK-like) 336 661 IPR011009 -
Phac2g04790 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Phac2g04790 667 Pfam Wall-associated receptor kinase C-terminal 171 260 IPR032872 -
Phac2g04790 667 ProSiteProfiles Protein kinase domain profile. 349 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04790 667 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04790 Phac-Chr2 44598213 44601784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04790 32 658 Receptor kinase-like Gene Family AT5G38260 40.155 2.79e-147 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac2g04790 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04790 - - vra:106766588 1172.15